Juglans regia (English walnut): 109001659
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Entry
109001659 CDS
T05245
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109001659
03041 Spliceosome [BR:
jre03041
]
109001659
03036 Chromosome and associated proteins [BR:
jre03036
]
109001659
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109001659
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109001659
mRNA cycle factors
Common to processing body (P body) and stress granule
109001659
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109001659
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109001659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
109001659
NCBI-ProteinID:
XP_018834571
UniProt:
A0A2I4FSE5
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Position
14:complement(27925659..27931935)
Genome browser
AA seq
619 aa
AA seq
DB search
MSTRTSWADLAANSAAENAAPGSSSVSNGSIGTTTAPSRSTYVPPHLRNRPPVADTPAPA
NSGPALSNDQSGHGGSRWSGAPRNDYGRSGYSGGGGRAGGWGGRSGGWDRGRDREVNPFG
EDDDTEQPFSEQENTGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNENIRRCKYV
RPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQSVQRPPRGARTVYPL
ALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPRAGARQTMLFSATFPKE
IQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRANGSQGKQA
LTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSLARALAELMQE
SNQEVPAWLSRYAARSSFGGGRNRRSGGGRFGGRDFRREGSFNRGGSDYYSGGNSSGGYG
ASSGGYGGGYGSGVASAWD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcgaacttcatgggcagatttggctgcaaactctgcggctgagaatgcagct
cctgggtcttcttctgttagcaatggcagcatagggaccacaaccgctccttcccggagc
acatatgttcctccacatcttcgaaatcgccctcctgttgctgacacacctgcaccagct
aatagtgggcctgctttgagtaatgaccagtctggacatggtgggtcacgatggtctggt
gctcctaggaatgattatggtcgatctgggtacagtggtggtggcggccgtgccggtgga
tgggggggcagaagtggtggttgggaccgtgggagagatcgggaagtgaacccttttgga
gaagatgatgacacagaacagccattttctgagcaggagaacaccggcatcaacttcgat
gcgtatgaggatatcccagtggagacaagtggtgaaaatgttcctccggctgtgaataca
tttgcggagattgatttgggtgaagcactcaatgagaatattcgcaggtgcaagtatgtg
aggccaactcctgtgcagcggcatgccatcccaatctctcttggggggcgggacttaatg
gcttgtgcccagactggttctggcaagacggctgctttttgtttccctatcatcagtggg
attatgaggggccagagtgtacagagaccacctcgtggggcacgaacagtgtacccactt
gctcttatcctctctccaactagggagctttcgatgcaaatacacgaggaagctaggaaa
ttctcatatcagacaggtgtaagagtggttgttgcttatggaggagctccaattaaccaa
cagctgcgggacctggagagaggtgttgatattcttgtggctactcctggaaggttggtt
gatttgctggaaagggccagagtttcattacagatgatcagatatttagccttggatgag
gcagatcgaatgctggatatgggttttgagcctcaaataaggaaaattgtggagcaaatg
gacatgcctcgagctggtgcaagacaaactatgctgttcagtgctactttccccaaagag
atacagagattggcggctgatttccttgcaaattatatttttttggctgttggaagagtg
ggctcaagtactgatttgatagtccaacgagtggaatttgttcatgaatctgacaaaaga
agtcacctcatggaccttcttcatgcacagagggctaatggttcacagggaaagcaagct
cttacattagtctttgtggagacaaagaagggagctgattcgctggaacattggttatgt
cttaatggttttcctgcaactactattcacggtgatagatcacaacaggaaagggagctg
gcattgaggtcctttaaaagtggaaacaccccaattttggttgcaactgatgtggctgca
cgtggtcttgatattccccatgttgcccatgtggtcaactttgatctcccaaatgatatt
gatgattatgttcaccgcattggacggacagggcgagctggcaaatcaggtttagctact
gccttcttcaatgagaataattcgtcattggcacgggctttagctgagctaatgcaagaa
tcaaatcaagaagtgcctgcttggctgtcccggtatgcagcccggtcttcttttggtgga
gggaggaaccgtcgttctggtggaggtcgatttggtgggcgtgatttcagaagggagggc
tcattcaataggggtggttctgattattacagtggaggcaacagcagcggtggatatggt
gcttcttctggtgggtatggtggaggatatggttcaggggtggccagtgcatgggactaa
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