Juglans regia (English walnut): 109001958
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Entry
109001958 CDS
T05245
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
jre
Juglans regia (English walnut)
Pathway
jre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109001958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109001958
03036 Chromosome and associated proteins [BR:
jre03036
]
109001958
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109001958
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109001958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
109001958
NCBI-ProteinID:
XP_035547999
UniProt:
A0A6P9EKG5
LinkDB
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Position
7:complement(42970857..43006011)
Genome browser
AA seq
1084 aa
AA seq
DB search
MDVRMDTSPSYFDPEDLTIREPFRRYGKRHSASSSSSYHEHSTSKYSGSRLLYDGHSIHS
PTNAALLLENIKQEVESIDADRSEGTPARTLSASKRRPPIDSHGMADMDAGADSVRYLLK
ACKHEDDSLADGGDTTFTIFASLLDSAFQGLMSIPDIILRFEGSCRNVSESIRYGSNVRH
GAVEEKLMRQKAQLLLDEAASWSLLWYLYGKVSEELPKELILYPQTSHLEACQFVADDHT
AQLCLRIVQWLEGLASKALDLESKVRGSHVGTYLPSSGVWHHTQRYLKKGASNKNTINHL
DFDAPTREHAHQLPDDKKQDESLLEDVWTLLRAGRLEEACDLCRSAGQPWRAATLCPFGG
LDLFPSVEAVVNNGKSRILQAIELESGPGHQWRLWKWASYCASEKIVEQDGGKFEAAVYA
AQCGNLKRMLPICTDWESACWAMAKSCLDVQVDLELAHLQPGRVDQMSRFGDVADGSPGN
LNGGHQPPVGSESWPVQVLNQQPRQLSALLQKLHSTETVHESVARGCKEQQRQIEMIMML
GDVPRLLDLIWSWIAPSEDDQNVFRPHGDPQMIRFGAHLVLVLRHLLADEMKDAFREKIM
NVGDLILHMYAMFLFSKQHEELVGIYASQLAHHRCIDLFVHMMELRLNSGVHVKYKIFLS
AMEYLPFSPGDDSKGSFEEIIERVLSRSREIKVGKYDKLSDVLEQHRQQGLQKAMVIQWL
CFTPPSTIADVKDVSTKLLLRALIHSNILFREFALISMWRVPAVPIGAHTLLSLLAEPLK
LLSDNHDMLEDYDISDNLREFQDWSEYYSCDATYRNWLKIELENAEVSPLELSQEEKQRA
ILAAKETLNASLSLLLRKGNPWLAATEDHIYKSEEPLFLELHATAMLCLPTGECMSPDAT
MCTTLTSALYSSVSEEVVLNRQLMVNVSISTRDNYCIEVVLRCLAVAGDGIGPQEDGGIL
STVLAAGFKGELLRFQAGVTMEISRLDAWYSSRDGSLEGPATYIVRSLCRRCCLPEVILR
CMQVSVSLMESGDPPESHDDLIELVACPDSGFLHLFSQQQLQEFLLFEREYSIFKMELQE
ELCS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcgcatggacacttctcccagctatttcgaccctgaagacctcaccatcagg
gagccattccgccgatatgggaaaaggcactcagcatcaagctcatcatcctatcatgaa
cactcaacttctaagtacagtggatccaggctattgtacgatggacatagcatccatagc
ccaactaatgctgccttacttcttgaaaatatcaaacaagaggtggagagcattgacgct
gatcgctcggaaggaacacctgcaaggacactatctgcttctaaaaggagaccgcccatt
gatagtcatggaatggctgacatggatgctggtgctgattcagttcgctatttgctgaaa
gcttgcaagcatgaggatgattcattggcagatggtggagacaccacttttaccatattt
gcatcgctacttgattccgcatttcaaggtttgatgtctattcctgatatcatactaaga
tttgagggatcttgccgaaatgtttcagagtcaattaggtatgggtccaatgtaaggcat
ggggccgtagaggagaaattgatgaggcagaaggctcagctcctgcttgatgaggctgct
tcctggtctcttttgtggtacctttatgggaaagtgtctgaagaactcccgaaagagcta
atcctgtacccccaaacatcacacttggaggcctgccagtttgttgcagatgatcataca
gcacaattgtgcctccggattgttcaatggcttgagggtttagcctccaaagcacttgat
ttggaaagcaaggtgcgaggatctcatgttggtacctatctacccagctctggtgtttgg
catcatactcaacggtatcttaagaaaggagcctccaataaaaataccattaatcacttg
gattttgatgctccaacacgtgaacatgctcatcagctacctgatgacaaaaaacaagat
gaatctcttttggaagatgtctggactcttctaagggctggaagactggaagaagcatgt
gatctttgccggtcagccggacagccatggagagctgcaacattgtgcccatttgggggg
ttggaccttttcccttctgttgaagccgtggtgaataatggaaagagtaggattttgcaa
gccattgaactggaaagtggcccaggacaccaatggcgtctttggaaatgggcttcctac
tgtgcatctgagaaaattgtggagcaagatggtggtaaatttgaagcagctgtatatgca
gcacagtgtggcaatttaaagcgcatgcttccaatctgcacagactgggagtctgcatgc
tgggcaatggcaaaatcatgtctagatgttcaggtggatttggaactagctcatctacaa
cccgggagagtggatcagatgagccgttttggagatgtagctgatggaagtcctggaaat
ctcaatggtggtcatcagcctcctgttgggtcggaaagttggccagtccaagttctgaac
cagcagccacgacaactttctgctcttcttcagaagcttcattcaacggaaacagtgcac
gaaagtgttgctcgtggatgcaaagagcagcaacgtcaaattgagatgattatgatgtta
ggggatgtaccacgcctgctggaccttatatggtcgtggatagcaccttcagaagatgat
caaaatgtattcaggcctcatggagatccccaaatgattcgatttggtgcacacctagtg
cttgtacttagacatttacttgctgacgaaatgaaggatgctttcagagaaaaaataatg
aatgttggtgatctcattctacacatgtatgcaatgtttcttttttcaaagcagcatgag
gagttagtgggcatatatgcttctcagcttgcacatcaccgttgcattgacctctttgtg
catatgatggaactgaggctgaacagcggggtgcatgtcaaatataagatcttcctttct
gccatggagtacttaccattttctcctggggacgattcaaaaggcagttttgaggaaatt
attgagagggtattgtcaagatctcgggagatcaaagttggtaaatatgataagttatca
gatgtactagaacaacaccggcagcagggtcttcaaaaagctatggttatccaatggctt
tgctttacacccccatccacaattgccgatgttaaggatgttagcacaaaacttcttttg
cgagccctaatacatagcaatatattattcagggagtttgctctgatttccatgtggaga
gtgccagcagtgccaattggtgcgcacacattactcagtcttcttgctgaacctttgaag
ctgctttcagataatcatgatatgttggaggattatgatatttctgataatttgagagag
ttccaagactggagtgagtattactcttgtgacgcaacatatcggaattggctcaaaatt
gaattggagaatgcagaggtttcacccctagaactctcacaggaggaaaaacaaagagcc
attttagcggccaaagagacactgaatgcatctctctcacttctactaagaaaaggaaat
ccttggttggccgcaactgaagatcatatatataaatcagaagagcctttatttctagaa
ttgcatgccacagcaatgctctgccttccgactggtgaatgtatgtctccagatgccaca
atgtgcactactttaacaagtgccctttactcttcagtgagcgaggaagttgtgttaaat
cgacaactaatggtgaatgtctccatatcaacgagggacaattactgcattgaggttgta
ctgcgatgcttggcagtagcaggtgatggaattgggcctcaggaagatggtggcatactc
agtactgttttggctgctggcttcaaaggtgagcttcttcgatttcaagctggagttacg
atggagatctcacgattagatgcttggtattcaagcagagatggttctttagaaggccca
gcaacatacattgtacggagtctttgtcgtaggtgctgtcttccagaagtcattcttcga
tgcatgcaagtatcagtttcgctcatggagtcgggtgatccacctgaaagccatgatgat
ttgattgaactagttgcgtgccctgatagtggatttcttcatttgtttagccaacaacaa
ttgcaggaattcttgctgtttgagagggaatactcaatattcaaaatggagcttcaggag
gaactttgttcttga
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