Juglans regia (English walnut): 109003679
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Entry
109003679 CDS
T05245
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109003679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jre03000
]
109003679
03021 Transcription machinery [BR:
jre03021
]
109003679
Transcription factors [BR:
jre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
109003679
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109003679
RNA polymerase III system
TFIIIB
109003679
RNA polymerase I system
SL1/TIF-1B
109003679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
109003679
NCBI-ProteinID:
XP_018837474
UniProt:
A0A2I4G0P8
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All DBs
Position
14:complement(28513211..28523327)
Genome browser
AA seq
201 aa
AA seq
DB search
MADQGGLEGSQPVDLKKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRD
ETYTAFENIYPVLTEFRKNQQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaaggaggcttggaaggaagccagcccgtagatcttaagaagcatccttct
gggatcgtccctaccctccagaatattgtgtcaacggtcaatttggattgcaagttggat
cttaaggccattgcacttcaagctcgtaatgcagaatacaatcccaagcggtttgctgct
gtaattatgaggataagggaaccaaaaaccacagccttaatttttgcttctggaaagatg
gtttgtactggagctaagagtgaacaacagtcaaagttagctgcccgaaagtatgctcgt
attattcagaagcttggttttccagctaagttcaaggatttcaagattcagaacattgtc
ggctcttgtgatgttaaattccccatcaggcttgaaggccttgcatattcccatggtgcc
ttttcaagttatgaaccagagctgttcccagggttgatctatcggatgaaacaaccgaaa
attgtgctgcttatttttgtgtcaggaaagattgttcttacaggagctaaggtgagagac
gagacctatacagcctttgagaacatataccctgtccttacagagttcaggaaaaaccag
caatga
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