Juglans regia (English walnut): 109007579
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Entry
109007579 CDS
T05245
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jre03036
]
109007579
03400 DNA repair and recombination proteins [BR:
jre03400
]
109007579
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109007579
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109007579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
109007579
NCBI-ProteinID:
XP_018842858
UniProt:
A0A2I4GG28
LinkDB
All DBs
Position
16:7007455..7049544
Genome browser
AA seq
1516 aa
AA seq
DB search
MEPDTGYRRAKANKRQLVELYDEDDGIDTVYRFKVLLPNGTSIGLTVRDIPLPEMPFGDF
INLVKNEYFRARKLNESMKQKRKIDWEGDRFYLEDVNGVKIRDSIKLKDFKPHSCHILQL
HDGSGVMANTFENMWDLTPDTDLLMELPEEYTFETALADLIDNSLQAVWSNRKNERRLIS
VNIASDDSISIFDTGPGMDGSNENSIVKWGKMGASLHRSSKGQAIGGKPPYLRPFVGMFG
YGGPSASMHLGRRALVSSKTKSSHKVYTLHLEREALLSSSGSELSWKTTGGMRDPLEDEL
SESPHGSFTKIEIFELKRNSLDIFILQCKIKDIYFPYIQCDEVSKSAKTITPIEFQVNGD
DLAETEGGEVAVTNLHSCNGPDFILQLRFSFKQANAAAKSPGSTASQEANARLKCVYFPS
IKGKESVEMILEKLEAEGCSITENYETFSRVSVRRLGRLLPDARWAWLPFMEFRHKKGDK
AHILKRCCWRVKCFVDTDAGFNPTPSKTDLAHHSPFTTALKNFGNKLYEKEKFVDVEIYR
DQKLLTPLQLEREYQDWILQMHDRYDQETECGEDQPVLVVSPANKKALGISSDVVRVHQV
LKRKGVSWKSGQKIKILKGACAGCHKNNVYAELEYFLLEGFQGDAGGEARIICRPLGIPD
DNGSIIAFNNGDASFNICGSLSLPINVIDSGKCLAIGSIEWNCQVDKQRQKSPSIIDLLS
VKQCQELEIDGALPVDGLVHAGQVPPSEIVAVVRPANFVSSSISKNLDQNDIVKSNLEMS
MEIKFREEAEDLQDVCHIYSRRVTPSSHHIYSKRITPSSRKGFHGLYIFPLGSKFPDLFQ
KAGVYTFSFYVDELTCNNCDKAVLVKASSKVGKWDLLSDGQSPPFSVRVGSCFPPFCLTC
NDIYGNRIPFTSTPEVMIKLQTIKGVLVDVEKMRIELSPNKFTLKVEDILIESNELDKIR
PNYQATLVICSRDKLSSVSFPCQVYPGSLQFVKARPPILDDQLLPGCIAKELVLEMFDAY
GNHISQGLEVELVVEGFCIQDQIGSKRKVDDNGCIDLGGLLKVTAGYGSKVSLAVLSGHE
VVFKQEFQAQKQEMQITSGVSLVQSPKLEYDESQSPYSNEKVMLLEDSSSLKQSEKFIMP
LITIEKELEDEVLQIGSRIGNLEKKLDFLYNSKAEIEQDISQLQASIEPCLPNSPPTKEE
LINRIQSNNHSAASVLCCLSREFSFQGLKNHFMEEIVGLVALLGTVRLNKLSRILAEYLG
EDQMLAVVCRSSAAASALEKFEHDGEVHCRHALHAEAAALGKSIYGRFLIVCLEDIRAYK
GEFEGSDPQRKLALPYPTFSSGKVPMGFVGYAVNMIDLDVGHLHTRTAAGHGLRETLFYC
LLREVQVYETMECMLEARHCIKHGAVSLDGGILRDNGIISLGFGNPQICFSVTAQESKPS
KEIVEIMKLFEENKSELRGVIHSIEKVTRSLKKYMKKFKKKKEKYQKLMDDMEPVVKDYC
LEYKKLCPENTGSSSY
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagatacggggtaccggagggcaaaggcgaataagaggcaactggtggaactc
tatgacgaagatgatggtattgacacggtgtataggttcaaagtcctattaccaaatggc
actagtataggactaacagtgagggatattcctctccctgaaatgcctttcggggacttc
attaatttggtgaaaaatgaatacttccgagctcgtaagctgaatgaatcaatgaagcag
aaaagaaaaatagattgggagggtgatcgcttttatcttgaggacgtgaacggtgtaaag
atcagagactcgattaaattaaaagattttaagccccatagttgtcacattttacagctt
catgatggctctggtgtgatggccaatacttttgagaatatgtgggacttgacaccagat
accgatttgttaatggaattaccagaggaatacacttttgaaactgcccttgcagatttg
attgataattccttgcaagcggtatggtctaaccgtaaaaatgaaagaaggctgatcagt
gtgaatattgccagcgatgatagcatttctatttttgataccggccctggaatggatggc
agtaatgaaaactctatagtgaagtggggaaagatgggtgcctcccttcacagatcctca
aaaggacaggcaattgggggaaaacctccatacttgaggcctttcgttggcatgtttgga
tacggaggaccaagtgcgtctatgcatctagggaggcgtgctttggtatcttcaaagaca
aaaagttcccacaaagtctatactttacatcttgaaagagaggccttactcagcagttct
ggttctgagcttagctggaagactactggtggcatgagggatcccttggaagatgaactt
agcgaatcacctcacgggagctttactaagatcgagatttttgagctaaaaagaaatagc
ttggacatatttatactccaatgcaagatcaaagacatctattttccatacattcagtgt
gatgaagtgtccaaatcagcaaagacaattacaccgatagaatttcaggttaatggtgat
gatttagctgaaactgaagggggagaggttgctgtcaccaacttgcattcctgcaatggt
cctgactttattctacagcttcgtttttccttcaagcaagctaatgctgcagccaaaagt
ccaggttcaacagcatctcaagaagccaatgcacgcctgaagtgtgtttattttccatca
attaaggggaaagaaagtgttgagatgattttggagaaactagaagctgaaggctgcagt
atcacagaaaactatgaaaccttcagtcgtgtctctgttcgacggcttggccgtttactt
ccagatgctcgctgggcatggcttccttttatggagttcaggcacaaaaagggagataag
gcccacatactgaagagatgttgctggagggttaaatgctttgttgacactgatgctggt
ttcaatccaacaccttctaagactgatctggcccaccatagtccttttactactgctcta
aagaatttcggcaataagctttatgaaaaagaaaagtttgtcgatgttgaaatttataga
gaccaaaagttgttgactcctttgcaactggagagagagtatcaagattggattcttcaa
atgcatgatcgttatgatcaagaaactgaatgtggagaggatcaacctgtccttgttgtc
agccctgcaaacaaaaaggctcttggcatatcatctgatgtcgtacgagtgcaccaagtt
ttgaaaaggaagggagtatcatggaaatccggtcaaaaaataaaaattctgaagggagca
tgtgctggatgccataagaacaatgtctatgcggaactggaatacttcctgcttgaagga
ttccaaggggatgctggcggggaagctcgaattatatgtaggcccctaggcatccctgat
gacaatggttccatcattgcatttaacaatggggatgccagttttaatatctgtggctct
ttgtccctacctatcaacgtgattgattctggaaagtgcttagctattggaagtatcgag
tggaattgccaagttgataaacaacgtcagaaatctccttcgataattgatctgctcagt
gttaaacaatgtcaagagctggagattgatggggcactacctgttgatggtctagttcat
gctggacaagttcctccttcagagattgtggctgttgtacggcctgccaattttgtttct
tctagcatctcaaagaacttggaccagaatgatattgtcaagagtaatttagaaatgtca
atggagattaaattcagagaagaagctgaggatcttcaagatgtgtgccatatttattca
aggcgtgtaacaccttcatctcaccatatttattcaaagcggataacaccttcatcacgt
aaaggatttcatggtttatatatctttccattgggttccaagtttccagatttatttcaa
aaagctggtgtttatacgttttcattctacgttgacgagttaacttgtaataattgtgac
aaagcagtgctagttaaggcatcttctaaggtgggaaaatgggatcttttgagtgatgga
cagagtccaccttttagcgtgagggtcggttcttgttttccacctttctgtttgacgtgt
aatgacatctatggcaatcgaattccttttacatcaacaccggaagtgatgatcaaactt
cagacaatcaagggtgtccttgtcgatgtagagaaaatgaggattgaactgtcacccaat
aaattcactctcaaagttgaggatatactgattgaaagcaatgagttagacaagatccgg
ccaaattatcaagcaactttggtgatatgctctagggataaattgtcttccgtctcattt
ccgtgtcaagtttaccctggatctttacaatttgtcaaggcccgaccaccaatattggat
gaccaactgcttccgggctgtattgctaaggagctcgtattagagatgtttgatgcatat
ggtaatcatatctcgcaaggcttggaagttgaattagttgtggaaggattttgcatacaa
gatcaaataggttcaaagcgtaaggttgatgataacggatgcattgaccttggtggcctt
ctgaaagtaacagcaggctatggaagtaaagtttcactggctgttctgtctggccatgaa
gttgttttcaagcaagagtttcaagctcaaaaacaggagatgcagattacgtctggggtc
tcccttgtgcaatccccaaaattggagtatgatgagagtcagtctccatattcgaatgaa
aaggtcatgcttcttgaggattcgtcttctctaaaacaatcagaaaaatttatcatgcca
ttgataactattgagaaggaacttgaggatgaagtactccaaattggttcgcgcattgga
aatctagagaagaaactggattttctctataatagtaaggcagaaatagagcaagacata
tctcagttgcaagcttctattgagccctgtcttccaaactccccacccacaaaagaggaa
ctgataaatcggatacaaagcaacaatcactctgcagcatctgtcctctgttgtctttca
agagaattctcctttcaagggctaaaaaaccatttcatggaagagatagttggcctggtt
gcacttcttggtacagttcgcctcaataagcttagcaggatattagcagagtacttgggt
gaagatcaaatgcttgctgttgtctgtagatcctctgcagctgcaagtgctcttgagaag
tttgaacacgatggagaagtgcattgtagacatgctcttcatgcagaagcagctgcactt
ggaaaatctatatatggccgatttcttattgtatgccttgaagatataagggcttacaag
ggagagtttgaaggtagtgaccctcagaggaagcttgccttgccgtatcctaccttttca
agtgggaaggtgccaatgggtttcgttggttatgcagttaatatgattgacttggacgtt
ggtcatttacacacaagaactgctgcaggccatggccttcgggagaccttattctattgt
cttctaagggaggtccaagtatatgaaaccatggaatgcatgttagaagcccgacattgt
ataaagcatggtgctgtctctctggatggtgggattttaagagacaatggaatcatttct
ctcggatttgggaatcctcagatatgtttttcagttaccgcacaagagagcaagccctcg
aaggaaattgtggagatcatgaagctttttgaagaaaataagtctgagttgaggggggtg
atccattctatagagaaggtgaccagatcccttaagaaatatatgaagaaattcaagaag
aaaaaagagaagtatcagaagcttatggatgatatggagccagtagtaaaagactactgt
ctggaatacaagaagctctgcccagagaacacaggctcctcatcctactga
DBGET
integrated database retrieval system
