Juglans regia (English walnut): 109009467
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Entry
109009467 CDS
T05245
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109009467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
109009467
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109009467
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109009467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Nairovirus_MLD
DNA_pol_B_palm
Motif
Other DBs
NCBI-GeneID:
109009467
NCBI-ProteinID:
XP_035538897
UniProt:
A0A2I4GNK2
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Position
11:33924317..33932311
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AA seq
645 aa
AA seq
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MVGSESPNGSSPQPARKYGITKPISLAGPTEADRHRNMELEKFLIDSGLYESEEEASRRK
EVLDRIDEIVKGWVKHLTHQRGYTDQMVEDANAVILTFGSYRLGVHGPGSDIDALCVGPS
YVNRDEDFFMVLHNILAEMEEVTELQPVPDAHVPVMKFKFLGISIDLLYASISLLVVPED
LDISPGSVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRMTLRCLKFWAKIRGVYSNVT
GFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFPVWH
PRKNPRDRLHHMPIITPSYPCMNSSYNVSASTLRVMVEQFHHGHSICEEIELSKGQWSVL
FEPYLFFEAYRNYLQVDIIAADSDDLLAWNGWVESRLRQLTLKIERDTNGMLQCHPFPNE
YVDTSKPCSHCAFFMGLQRKEGVRGQEGQQFDIRATVDEFRQEINMYMFWKPGMDIFVSH
VRRKQLPAFVFPDGYKRSRLSRHVSRQAEKTCEDAVGCWPGSTERPLKRKSDPGMVDVRP
DKPDKRVSISTGLLESVSRTGGLSQVSFGEGVGLECVATGDVDSKSKIRLFDGQLGSEQG
IVQNHIVNGETGIGDPVNLTEQTFVSKNLPKVINEAMLTEAVEKT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctgaaagccccaacggttcttcgccacagccggcgaggaagtacggtatc
acaaagccaatctctcttgcagggcccaccgaggctgatcgtcaccgcaatatggaattg
gaaaagttcttgattgattcggggctatatgagagtgaggaagaagcttcgaggagaaaa
gaggttctggaccgcattgatgagattgtaaaaggttgggtcaagcacttaacccaccag
aggggctacacagatcagatggtggaggatgcaaatgctgtcattcttacttttggttcc
tatcgactgggggtacatgggcctgggtctgacatcgacgcattgtgtgttgggccatct
tatgttaatcgagatgaagatttttttatggttttgcataatattctggctgaaatggaa
gaagttaccgagcttcagccagttccagatgctcatgtcccagtaatgaaattcaaattt
ctagggatatcaattgatcttctctatgcaagtatatctcttttggttgttccagaagac
ctggacatctcacctgggtctgttctgtacaatgttgatgagccaactgttcgaagcctt
aatggatgcagggttgcagaccaaattcttaaacttgttccaaatgttgagcacttccgc
atgacactcagatgtttgaagttttgggctaaaatacgaggtgtttattccaatgttact
ggattcctcggtggtgtaaattgggcccttttggtcgctcgggtatgtcagctttacccc
aatgcaattcctagtatgctggtttctcgattcttcagagtttatacacaatggcgttgg
ccaaatcctgtgatgttatgcccaatagaagagaatgaacttgggtttccagtatggcat
cctcgcaaaaaccctagggaccggcttcatcacatgccaataataactccttcctaccct
tgtatgaattctagctacaatgtctcagcaagtactcttcgtgttatggtggagcagttc
caccatggtcatagcatctgtgaggagattgagctgagcaaaggccaatggagtgtacta
tttgagccctatctattttttgaggcatacagaaattatttacaagtggatataattgcg
gctgattctgatgatctgcttgcttggaacggatgggtggagtctcgacttagacagctt
accctgaagatagagagggatacaaatgggatgctgcagtgccatccttttccgaatgaa
tatgtagacacgtcaaagccatgttctcattgtgctttcttcatgggcttgcagaggaaa
gagggagttagaggtcaagaaggccagcaatttgatatacgtgcaacagttgatgagttt
aggcaagagatcaatatgtacatgttttggaaaccaggaatggatatttttgtttctcat
gtccgtcgaaagcagcttcctgcttttgtttttcctgatggttataaacgttctcgattg
tcgaggcacgtaagccggcaggctgaaaaaacttgtgaagatgctgtggggtgctggcct
ggctctactgaaaggcctctcaagaggaaaagtgatcctggaatggtggatgtgaggccg
gataaaccagataagcgagtttctattagcacgggactgctggagtctgtttctaggact
ggtggattatctcaggtcagctttggtgaaggggttggattagagtgtgtagcaactggg
gatgtcgatagcaaatctaaaattaggttatttgatggacagttagggagtgaacagggt
atagtacaaaatcatatagtgaacggtgaaactggtattggtgaccctgtcaacttaact
gagcaaacttttgtgagtaagaatttgccaaaagttataaatgaggcaatgctaactgaa
gcagtggagaaaacttaa
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