Juglans regia (English walnut): 109010170
Help
Entry
109010170 CDS
T05245
Name
(RefSeq) protein CELLULOSE SYNTHASE INTERACTIVE 1-like
Organism
jre
Juglans regia (English walnut)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
C2
HEAT_2
V-ATPase_H_N
HEAT_EZ
V-ATPase_H_C
ELMO_ARM
CTNNBL
Motif
Other DBs
NCBI-GeneID:
109010170
NCBI-ProteinID:
XP_018846455
UniProt:
A0A2I4GRC9
LinkDB
All DBs
Position
10:9287427..9297889
Genome browser
AA seq
2114 aa
AA seq
DB search
MGSRERSSMEDPDGTLASVAQSIEQLRQSSSSVQEKEYSLRQLLELIDTRENAFSAVGSH
SQAVPVLVSLLRSGSLGVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSVDGQ
VAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWEQLAKGHKTGNVVDSLLTGALKNLAS
STEGFWTATVQAGGVDVLVKLLTTGQSSTQANVCFLLACMMMEDASVCSIVLAAEATKQF
LNLLGPGNEASVRAEAAGALKSLSAQSKEARREIANSTGIPALINATIAPSKEFMQGEYA
QALQENAMCALASISGGLSYVISSLGQSLESCTSPAQVADTLGALASALMIYDSKAESMK
ASDPVVIEQTLLKQLKPQLPFLVQERTIEALASLYGNVILSSKLANSDAKRLLVGLITMA
TNEVQDELMKALLTLCNNEGSLWRALRGREGVQLLISLLGLSSEQQQECAVALLCLLSTE
NDESKWAITAAGGIPPLVQILESGSAKAKEDSASILRNLCNHSEDIRACVESADAVPALL
WLLKNGSHNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALKSMLSVVP
LNDILREGSAANDAMETMIKILSSTKEETQAKSASALAGIFETRKDLRESSIAVKTLWSA
MKLLNAESESMLVESSRCLAAIFLSIKENRDVAAVARDALFPLVGLANSSILEVAELATC
ALANLILDCEISEKAVPGEIILPATRVLGEGSVSGKTHAAAAIARLLHSRQIDSALTDCV
NRAGTVLALVSFLESAIGGSVATSEALGALAILSRSKGASERIKPAWEVLAEFPKSITPI
VLSIANSTPLLQDKAIEILSRLCRDQPTVLGDTVACASGCVCSIARRVIGSTNPNVKTGG
AALLICAATVNHQRVVEDINQSHLCSNLIQSLVAMLSSGQSSFLGNKGDDVKESISIYRH
AKEEPENDKSNLGTTVISDENLAIWLLSVLACHDEKSKIVIMEAGAIEVLTDRISDCFSQ
YIQIDFKEDSSIWVCALLLAILFQNREIIRAHATMKCIPVLANLLKSEESANRYFAAQAV
ASLVCNGSRGTLLSVANSGAAVGLISLLGCADVDIYDLLQLSEEFALVPYPEQVSLERLF
RVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLAKDCPPNKIVMVESGALE
ALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVSQLVAVLRLGGRGARYSAA
KALESLFSADHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSRALAVAD
VEMNAVDVLCKILSSNCSMELKGDAAELCGVLFGNTRIRSTMASARCVEPLVSLLVTEFS
PAQQSVVHALDKLVDDEQLAELVAANGAVIPLVGLLYGRNHMLHEAISRALVKLGKDRPA
CKMEMVKAGIIESVLNILHDAPDFLCSAFAELLRILTNNASIAKGPSAAKVVELLFLLLS
RPEFGPDGQHSVLQVLVNILEHKQCRAEYTLTSHQAIEPLVPLLDSPASAVQQLAAELLS
HLLSEERLQKDSVTQQVIGPLIRVLGSGIHILQQRAVKALVSLAVTWPNEIAKEGGVNEL
SKVILQADPSLPHALWESASSVLASILQFSSDFYLEVPVAVLVRLLHSGSESTVIGALNA
LLVLESDDATSAEAMAESGAIEALLELLRCHQSEETAARLLEVLLNNVKIRETKATKSAI
LPLSQYLLDPQTQAQQARLLATLALGDLFQNESLARSSDAVSACRALVNVLEEQPTEEMK
VVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPDTSIQAAMFVKLLFSNHTIQE
YASSETVRAITAAIEKDLWATGTVNEEYLKSLNALFSNFPRLRATEPATLSIPHLITSLK
TGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEF
LLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNSPPRQTKVVSTGPSPEWDESFAWT
FESPPKGQKLHISCKNKSKMGKNSFGKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLE
IEFQWSNTIDPIEK
NT seq
6345 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaagagagcgtagcagcatggaggatccagatgggaccttagcaagtgttgct
caaagcattgagcagctccgtcagagttcctcatctgtacaagagaaagagtattcatta
agacagttgctggaacttattgatacacgtgaaaatgctttcagtgcggttggatctcac
tctcaggcagttccggtacttgtttctcttctccggtcagggtcactcggagtgaagata
caggctgcaactgttttaggttcactctgtaaggagaatgagctacgggtaaaagtcttg
ctgggaggatgcattccaccattgcttggtctgctcaagtccagctcagtagatggtcag
gtggcagctgcaaagactatttatgctgtttctcaaggtggcgccaaggatcatgttgga
tcaaaaattttttcaactgaaggagttgttcctgtgctctgggagcagctagccaaaggg
cacaagactggaaatgttgttgatagcttattgactggagcgttaaagaacctagccagc
agcactgagggattctggactgcaacagttcaagctggaggggtggatgtacttgtgaag
ttgctgacaacgggacagtcaagcactcaagcaaatgtgtgttttcttcttgcgtgtatg
atgatggaggatgcatctgtttgttctatagtgttggctgcagaagctacaaaacaattt
ctcaacctattaggacctggcaatgaagcttctgtcagagcagaagctgcaggtgctctt
aaatctctttcagcccaaagtaaagaagcaaggcgggagatagctaattccactggtatt
cctgctctgataaatgctactatagctccttccaaagaattcatgcagggcgagtacgcc
caagcattgcaggagaatgccatgtgtgctttagcaagcatttctggtggtttgtcatat
gtcatctcaagccttggtcaaagtcttgaatcatgcacttcacctgctcaagttgctgac
acattaggagcattagcttcagctttgatgatctatgatagtaaagcagaatctatgaag
gcatctgatcctgtggttattgagcagactttgcttaagcagttaaaaccccagttacct
tttctagtgcaggagcgaacaatagaagccctagccagtttgtatgggaatgtcatactc
tcaagtaaacttgcaaattctgatgcaaaacgtttgcttgttggtttgataacaatggcc
accaatgaagtgcaggatgagcttatgaaagctcttctcacactttgtaacaatgaaggc
agtctatggcgtgccctgcgaggccgtgagggagtccagctattaatttctcttcttggg
ctttcatcagaacaacagcaagaatgtgcagttgcattactttgccttctatcaactgaa
aatgatgaaagtaagtgggctatcactgctgctggtggcatacctccacttgtccaaatt
ctagagtcagggtctgcaaaagccaaggaagattcagcatcaatccttaggaacctatgc
aatcacagtgaagatatacgtgcttgtgttgaaagtgctgatgctgttcctgcattgtta
tggctactgaagaatggaagccataatgggaaggaaattgctgcaaagactttgaatcat
ttaatccacaaatctgatactgcaactatcagccagctcactgcattactgaccagtgat
ctacctgaatctaaagtatatgtattggatgccttgaaaagcatgctctctgtggttccc
ctcaatgatatattgcgcgaaggtagtgctgccaatgatgcaatggagacaatgataaaa
atcttgagctcaactaaggaagagactcaggctaagtctgcatcagctctagctggaatt
tttgaaactaggaaggacctgcgagaaagtagcatagctgttaaaactctatggtcggcc
atgaagctgcttaatgctgaatccgaaagcatgcttgtagagtcctcgcgttgtcttgct
gcaatatttctttcaatcaaagagaaccgggatgtcgcagctgttgctagagatgcattg
tttcccttagttgggcttgctaactcttccattctggaagttgctgagctggcaacatgt
gctctggcaaatcttattttagattgtgaaatatcagaaaaagctgttcctggagaaatt
atattgcctgctactagggttttgggtgaaggatcagtttctggaaagacacatgcagca
gcagcaattgctcgtctgcttcattctcgccaaattgattctgccttaactgactgtgtg
aatcgtgctggaacagttcttgcattagtttctttcctagaatctgctattggtggatct
gttgccacatccgaggctctgggtgcacttgcgattctgtccagatcaaagggggctagt
gagcgtataaaacccgcatgggaagttttagctgaattcccgaaaagcatcaccccaata
gttttatctatcgccaattcaacaccgttgttgcaggataaagccattgaaatattgtca
cggctttgccgggatcagcctactgttttaggtgatacagttgcctgtgcctctggatgt
gtatgctcaattgctagaagggttatcggttccactaacccaaatgtcaaaactgggggt
gctgcacttcttatttgtgctgctacagttaatcaccaaagagtggtggaagatattaat
cagtcacacttgtgttcaaatcttattcagtctcttgttgcaatgcttagttctggacaa
tcttcttttttgggaaataagggtgatgatgtcaaggaatccattagcatttacaggcat
gctaaagaagaacctgagaatgacaaatccaatttgggaacaacggtcatatctgatgag
aacctagccatatggcttctttctgttcttgcctgtcatgatgaaaagagtaaaattgtg
attatggaggctggagctatcgaagtcctcactgatagaatatcagattgcttttctcag
tacattcagattgattttaaggaagatagcagcatctgggtttgtgctctacttttagca
attttatttcaaaatagagagatcatacgagcacatgcaaccatgaaatgtataccagta
cttgcaaatttgttgaaatcagaggagtcagcaaacagatattttgctgctcaagcagtt
gccagtttagtgtgtaatggtagcagaggaactcttctatctgtcgcaaattctggggct
gcagttgggcttatttccttacttggatgtgctgatgttgacatatatgatctactgcag
ctttcagaggagtttgctttggtgccatatccagaacaagtctctcttgagaggttgttt
agagtagatgacataagggttggtgccacttccaggaaagcaatacctgcccttgtcgat
ctgcttaaacctattccagatcgtcctggagcaccatttctagcacttgggctcctgact
cagctggcgaaagactgtccaccaaataagattgtaatggtagaatcaggagctttggaa
gcactgaccaagtatctttcacttggtccacaagatgcaactgaggaggctgctactgat
ctgttagggatcctattcagcagtgctgaaatacgtagacacgagtctgcatttggtgct
gtcagtcaacttgtagcagttttacgtttaggtggtaggggtgcaagatatagtgctgca
aaagcattggaaagcctcttctctgctgaccatattaggaatgcagaaactgctcgacaa
gctgttcaacccttggtggagattctgaatacgggtttggagagggagcagcatgctgct
attgctgcattggttagactattgagtgaaaatccatcaagagcccttgctgttgcagat
gttgaaatgaatgctgtggatgtcctttgcaagatcctttcatcaaattgttcaatggaa
ctgaaaggggatgctgctgaattgtgtggcgttctttttggaaatacaagaatcaggtcc
acgatggcttcagcacgctgtgttgagcctctggtttctctccttgtgacagagttcagt
cccgctcagcagtcagttgtccatgcattggataaacttgttgatgatgagcaattggca
gagctagttgctgcaaatggtgcagttattcctcttgtcggccttctatatggtaggaat
cacatgcttcacgaggctatttccagagcccttgtgaagttagggaaagacaggcctgct
tgtaagatggaaatggtgaaagctggaataattgaaagcgttctcaacatcctccatgat
gcaccggattttctctgttccgcctttgctgaactgctgcgaatattgaccaataatgct
agcattgctaaaggaccatctgctgcaaaagtcgttgagctcctttttctgttgctgtcc
aggccagagtttgggcctgatgggcagcacagtgtattacaggttcttgtcaatatttta
gagcataaacagtgtcgcgctgagtatacgctgacctctcaccaagctatagagccactt
gtccctttacttgattctccagcttcggcagtgcaacagttggcggctgagcttctatcc
catctactctcggaggaacgacttcagaaggattcggtgacacaacaagtaattggtccc
cttatacgagttcttggttccggtatacacatactgcagcagagagctgtgaaggctctt
gtaagtctggcagtgacatggccaaatgagattgcaaaagagggtggtgtcaatgaactt
tctaaagtgatattgcaagctgatccttcgcttcctcatgctttgtgggaatctgcttct
tctgttttggcaagtattctgcaatttagttctgacttttatttggaagtgcctgttgct
gtgttggtcaggttgcttcattctgggtcagagagcacagtaatcggtgcattgaatgct
cttcttgtgttggaaagtgatgatgcaaccagtgctgaagcaatggctgaaagtggtgcc
atagaggcacttttggaacttttgaggtgtcatcagagtgaggaaaccgctgcaaggctg
ttggaagtactgttgaacaatgtgaagatcagagaaacaaaagctactaaatctgccatt
ttaccattgtcccagtatctcttggatccacaaacccaagctcagcaagcaaggttactg
gcaactttggcccttggtgatctatttcagaatgagagtcttgctcgaagctccgatgct
gtttcagcttgccgtgctcttgttaatgtacttgaagaacaacccacagaggaaatgaaa
gttgtagctatatgtgcattgcaaaaccttgtgatgtacagtcggtcaaataaaagagca
gttgccgaggctggtggagtacaggttgtattagatcttattggttcgagtgatccggat
acgtccatacaggcagcaatgtttgttaaacttctcttctctaatcataccattcaagaa
tacgcttctagtgaaacagtgagagctataactgctgctattgaaaaggatttgtgggcc
actggaactgtgaatgaggagtatctgaaatctctaaatgctctcttcagcaacttccca
cgcttgagagccactgagcctgcaacacttagcattccccatctgattacatccctcaaa
actgggtcagaggcaactcaagaagctgctttggacgcactttttcttcttaggcaagct
tggtcagcgtgcccggccgaagtttctagagcccagtcaatagccgcagcagatgcaatc
ccattgctgcaatacctaatccagtctggccctcctcggtttcaggagaaggcggaattt
ctattgcagtgtttgccggggacattggttgtgataatcaagcgtggtaacaatatgaaa
cagtcagtggggaacccaagtgtttattgtaagcttacacttggcaacagtcctcccagg
caaaccaaggtggtttccactggtccaagtccggagtgggacgagagctttgcatggacc
tttgaaagccctccaaagggccaaaagcttcatatttcttgcaagaacaagagcaaaatg
gggaagaactcatttggaaaagtgacaatccagattgatcgggtggtaatgctgggtgca
gttgctggtgagtacactctgttaccagaaagcaaaagtggtccctcacgaaatttagaa
atagaattccagtggtctaatacgatagacccaatagagaagtaa
DBGET
integrated database retrieval system
