Kazachstania africana: KAFR_0H01020
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Entry
KAFR_0H01020 CDS
T02487
Symbol
KAFR0H01020
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
kaf
Kazachstania africana
Pathway
kaf03022
Basal transcription factors
kaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KAFR_0H01020 (KAFR0H01020)
09124 Replication and repair
03420 Nucleotide excision repair
KAFR_0H01020 (KAFR0H01020)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaf03021
]
KAFR_0H01020 (KAFR0H01020)
03400 DNA repair and recombination proteins [BR:
kaf03400
]
KAFR_0H01020 (KAFR0H01020)
Transcription machinery [BR:
kaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KAFR_0H01020 (KAFR0H01020)
DNA repair and recombination proteins [BR:
kaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KAFR_0H01020 (KAFR0H01020)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
13887509
NCBI-ProteinID:
XP_003958647
UniProt:
H2AYV6
LinkDB
All DBs
Position
8:complement(184831..185817)
Genome browser
AA seq
328 aa
AA seq
DB search
MDAIADPNFQHSTKRSTVLEETPSLLAVIIDIAPKLWAEFDEEKDTEGSIINVLQALLVF
LNAHLAFNTSNQVAVIAAHSQGIKYLYPENNINKNDVLKSDKDLSIINKGMYRRFRNVDE
VLVEELYSLFKEEQNELDKITQKSTLPGAISAGLTYVNRISKEMETLSLKSRLMVLTCGS
GMANKEEIFQYIPIMNCIFSATKLKCPVDVVKIGGSKESTFLQQTTDATHGVYLHVETTK
GLIQYLTTAMFIDPSLRQIIVKPNQGSVDFRTSCYLTGKVVAVGFICSVCLCVLSIIPPG
NKCPACDSEFDERVINKLKKKTYSSKVS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatgccattgccgacccaaactttcaacatagtacaaaaagatctacggtcctggag
gaaacgccctctttattagccgtcataatagatattgcaccaaaattgtgggcagaattt
gatgaggaaaaggatacagaaggtagcatcatcaatgtgttacaggcgctactagtgttc
ttaaatgcacatttagcattcaatacatcaaatcaagtagcagtgatagcagcgcactct
cagggaataaagtatctgtatccagagaataatataaataaaaatgatgtgctaaagagt
gataaggacttgtcaattatcaataagggtatgtatagaagattcagaaacgtcgatgaa
gtattggtagaggagttatattctcttttcaaagaggaacagaatgaacttgataaaatt
actcaaaagagtacgctacctggcgctatatcagctggcttaacctacgtgaatagaata
tctaaggagatggaaacattatcattaaagtctagattgatggtgctgacatgcggaagc
ggaatggccaataaagaagaaatcttccagtatattcccattatgaattgcatcttttca
gcaactaagcttaagtgtcccgttgatgtggttaagataggtgggtctaaggaaagcact
ttcctacagcaaactacagacgctactcatggtgtttatctacatgtagagactactaag
ggtcttatacaatacttgactacggccatgtttatcgacccatctctaaggcaaattatc
gttaagccaaatcagggatcagtagatttcagaacttcatgttacttgactggtaaggtc
gtcgcagtagggtttatctgttccgtctgtttgtgtgttttatccattattccaccaggc
aacaaatgcccagcttgtgattcagaattcgacgaaagggtcatcaataaactaaagaaa
aagacctatagttccaaggttagttaa
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