Ketobacter alkanivorans: Kalk_12520
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Entry
Kalk_12520 CDS
T05294
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kak
Ketobacter alkanivorans
Pathway
kak03420
Nucleotide excision repair
kak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Kalk_12520
03430 Mismatch repair
Kalk_12520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kak03400
]
Kalk_12520
Enzymes [BR:
kak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Kalk_12520
DNA repair and recombination proteins [BR:
kak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Kalk_12520
MMR (mismatch excision repair)
Other MMR factors
Kalk_12520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AUM13200
UniProt:
A0A2K9LLS4
LinkDB
All DBs
Position
2930524..2932683
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AA seq
719 aa
AA seq
DB search
MHQSSLIQSLNSAQAQAVTSMADRLLVLAGAGSGKTRVLVHRIAWLIKEQQLSPFSILAV
TFTNKAAAEMRNRIETLMRAPSGSMWVGTFHGIAHRLLRMHWQEAGLPQNFQILDSDDQL
RLVKRIMRQQELDESRWPPKQAQAFINSNKDEGLRPDHIDDYGDIYQKTLIGVYRQYQEA
CERGGMLDFAELLLRSHELWLHQPQLLAHYQQRFRHILVDEFQDTNRIQYAWLQMLAGKN
VPITIVGDDDQSIYGWRGARIENIRSFGDDFGRTEVVRLEQNYRSTAMILNAANGVIANN
RDRLGKQLWTSGEDGEPISLYSAFNEVDEARFVAERIQQALQQGLRRSEIAILYRSNAQS
RVLEEAMLRGSIPYRIYGGHRFFERAEIKNALAYLRLICHRDDDAAFERVVNTPSRGLGD
KSLERIRNTARELKVPMWQASLTVLQHKELSTKAGKSLHEFLGLIELLDQELRGLGLSEQ
AERVIEASGLIAFHQNEKGDRGEARVENLKELISATREFEANGEGDSASLAAFLDHAALE
AGDTQAQADEDCVQMMTLHSAKGLEFPIVFMVGVEEGLFPSMKSADDLDRMEEERRLAYV
GITRAMKKLFISHAESRRIYGSEALHAPSRFIREIPHHCLQEVRAAAKITRPMAVPRGRA
AVQNTDTPYRLGRSVRHPKFGDGVIMGCEGQGPNSRVRVNFAGAGEKWLVAQYARLELL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaatcttcgttaatacagtctcttaacagtgcccaggctcaggcagtcacttcc
atggcggatcggttgctggtgttggccggtgccggcagcggtaagactcgagtgctggtg
catcgcattgcttggctaattaaagagcaacagctctctcctttcagcatattggcggtg
acttttaccaataaagctgccgcagaaatgcgcaatcgcatagaaacattaatgcgcgct
cccagcggttccatgtgggtgggtacatttcacggcattgctcatcgcttgctgcgtatg
cattggcaggaggccgggctacctcagaattttcagatactcgattcagatgatcagctg
cgtctggtgaaacgaatcatgcgtcagcaggaactggatgagtctcgttggccgccgaaa
caggcgcaggcttttatcaacagcaataaggatgaaggcttacgtccggatcatatcgac
gattatggcgacatttaccagaagacattgatcggcgtatacaggcagtatcaggaagcc
tgcgagcgtggcggtatgctggattttgccgagctgctgctgcgcagtcatgagttgtgg
ttacatcaaccgcagttgctggcgcattatcaacagcgttttcgtcatatcctggtggat
gaatttcaggataccaaccgtattcagtatgcctggctgcaaatgttggcgggcaagaat
gtgcccatcaccattgtgggcgacgatgatcagtccatttacggctggcgcggtgctcgt
atagaaaacattcgatccttcggtgatgactttggtcgtacggaggtggtgaggttagag
cagaattaccggtccacggcgatgatattgaatgctgccaacggcgtgatcgcgaacaac
cgtgaccgcctgggtaagcaactgtggacatccggtgaggatggcgagcccatttccctt
tactctgcctttaacgaggtagacgaagcccgctttgtggcggagcgtatccagcaagcc
ttacagcaggggttgcggcgcagtgaaatagccattttgtaccgctccaacgcgcagtcg
cgggtgttggaagaggcgatgctgcggggcagcattccttatcgtatttacggtggccat
cgcttttttgagcgggcagaaattaaaaatgcgttggcgtatctgcgtttgatctgtcat
cgggatgatgatgctgcctttgaacgcgtggtaaacacgccgtctcgaggtttgggtgat
aaatcgttggaacggattcgtaacaccgcacgtgaactgaaagtgccgatgtggcaggct
agcctcacggtgttgcagcacaaagaactgtccaccaaagccgggaaatccctccatgag
tttcttgggttgatcgagttgcttgatcaggagctgcgcgggctgggtttgtcggagcag
gcggaacgggttattgaggcctccggcctgattgcatttcaccagaatgaaaaaggcgat
cggggcgaagctcgggttgagaacctcaaggaattaatcagtgccacccgtgagtttgag
gcaaatggcgaaggcgatagcgcctcactggcggcgtttttggatcacgcggcgttggag
gcaggtgatactcaggcccaggcggacgaagactgtgtgcaaatgatgaccttgcattcc
gccaaggggctggaatttcctattgtctttatggtgggcgtggaagaggggttgttcccg
tcgatgaagtcggcggacgacctggatcgcatggaagaggaacgccgtctggcctatgtg
ggtatcacgcgggctatgaaaaaactgttcattagtcacgcagagagccgccgcatatac
ggctcggaggcgctgcatgcgccatcacgttttatccgtgagataccgcaccattgcctg
caggaggtgcgggccgctgcaaaaatcacccggccgatggccgtgccgcggggccgtgct
gccgtgcagaatacagacacaccctaccgattggggcgctcggtgcgtcatcccaaattt
ggcgatggtgtgattatggggtgcgaaggacaaggccccaattcacgagtccgcgttaat
tttgccggtgccggggagaagtggctggtagcccagtatgcccggctggaattgctctag
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