KEGG   Ketobacter alkanivorans: Kalk_19120
Entry
Kalk_19120        CDS       T05294                                 
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
kak  Ketobacter alkanivorans
Brite
KEGG Orthology (KO) [BR:kak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kak03016]
    Kalk_19120
Enzymes [BR:kak01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     Kalk_19120
Transfer RNA biogenesis [BR:kak03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    Kalk_19120
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_8 FAD_binding_2 FAD_binding_3 Pyr_redox_2 GIDA HI0933_like Thi4 Pyr_redox AlaDh_PNT_C 3HCDH_N FAD_oxidored Pyr_redox_3 NAD_binding_9 NAD_binding_2 Trp_halogenase NAD_Gly3P_dh_N
Other DBs
NCBI-ProteinID: AUM14408
UniProt: A0A2K9LQ06
LinkDB
Position
complement(4467380..4469404)
AA seq 674 aa
MKQPSTYSQIIQPAKIEWQNSTPVSEQFGDVYFSRDSGAAESRYVFLDNNHLAQRWHSQQ
LTSFTIAETGFGTGLNFMCAADLWRTTKLSGALSPNAHLHFVSVEKYPLSKSDLQHACQL
HPQYNWLSTCLLQQYPAPVAGSHRLYFPECNITLTLIYGEAINSFQQLEGLVDAWFLDGF
APAKNPDMWQPELFKHIGRLSHEHATAATFTAAGVVKRGLQSVGFKMEKVPGFGSKRDML
RGTIATPEPAAQNLSHAEKPWFHYAYREQCKIPSKVAIIGAGLAGATAANSLARRGWQVS
VFEKEAQIASHGSGNPSGITFTKLSLHDTPQNRYYQSAYLYACRYLSNTLRRLNIKEGKD
WRFNGVLRLAYNEKEAADQAALLDAQYWPTELMQPLTPEQIHQITGLVTDLGGVMLHGGG
WLNPAALCHTLLQQPDISLHTGHAINQLHLEDRRWFLDDHGPFDAVVLASAFDCSHYSQT
GHLPLKPVRGQISFVPQTEESSNLRHAINYNGYINPAREGFHCLGATFTPKLGTPEQRQE
DHQWNCDQLISTLPNLADQLCLPDAHPLQGRVGFRCQTPDYLPVVGPLPNQEYFQDQYKD
LSKGFLKRTFPVGQTLPGLFVSSGHGSRGITSTCFGAEIIASYLSGEPQIADKDVLFAIH
PARFLIRNIIRRSR
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgaagcaaccctccacttactcgcaaatcattcaacccgcaaaaattgaatggcagaac
agtacgccggtatctgaacagttcggtgatgtgtacttttcccgcgatagcggggcggct
gaatcacgctatgtgtttttagacaacaatcatttggcgcaacgctggcacagccaacag
ctcaccagctttaccattgccgaaaccggctttggtaccggcctgaatttcatgtgcgct
gcggatctgtggcgcacaaccaaactcagcggagcgctgtcgcctaatgctcacctgcac
ttcgtcagtgtggaaaagtatccgttgtccaagagcgacttgcagcacgcctgccagctg
catccacaatacaactggcttagcacctgcctgctacaacaataccctgcccccgtggct
ggcagccatcgcctgtacttccctgaatgcaatatcacgctcaccctgatttatggggag
gccataaacagctttcagcaactcgaaggtctggtggatgcctggtttttggatggcttt
gcaccggccaagaatcccgacatgtggcagccggagctgttcaaacacataggcagactc
agccatgaacacgcaacggcagccacctttacggcggcaggcgtagtaaaacgggggttg
cagtcagtcggttttaaaatggaaaaggtgccaggttttggcagcaagcgagacatgctg
cgaggcaccatcgctacgcctgagcccgccgcgcaaaacctttcacatgcagaaaaaccc
tggtttcattacgcctatcgggagcaatgcaaaataccgagcaaagtggccattattggc
gcaggcctggctggagccactgcggccaacagcttggcccgtcgtggctggcaggtcagc
gtattcgaaaaggaagcccaaatcgccagccacggttcgggcaaccccagcggcatcacg
ttcaccaaattgagcctgcacgacacaccgcagaaccgctattatcagtcagcttatctc
tacgcctgccgctatctaagtaacaccctgcgacgcctgaacataaaggaaggcaaggac
tggcgcttcaacggggtactgcggttggcctacaacgaaaaagaagcggccgatcaggct
gcgctgctggatgctcaatattggccgacggaattgatgcaacccctgacgcccgagcaa
attcaccagatcaccgggttggtcacggatctgggcggtgtaatgctgcatggcgggggt
tggctgaatcctgcagcactgtgtcacaccttactgcagcagcctgatatatcgttacac
accgggcacgccattaatcagctacacctcgaagatcgacgctggtttctggatgatcac
ggacctttcgacgcagttgttctggcaagcgcattcgattgcagccactacagccaaacc
ggccaccttcctctgaagccggtaagaggccaaatcagctttgtcccccagactgaagag
tccagcaatctgcggcatgccatcaactacaatggctacatcaacccggccagagagggt
tttcattgcctaggggcaacattcacccccaaactgggcacgccagagcagcggcaagaa
gatcaccaatggaactgtgatcaacttatcagcactctgcccaatttggccgatcagctg
tgtttacccgacgcccacccgctgcagggacgtgtaggttttcgctgccaaaccccagac
tacctgcccgtggtgggcccactgcccaatcaagaatacttccaggatcagtataaggat
ctcagcaaaggctttctcaagcgcacctttcctgttggacaaacactcccggggctgttt
gtaagcagcggccacggctctcgcggcataacctcaacctgctttggggcagagatcatc
gccagttacctgtcgggggagccccaaatagcggacaaggatgtattgtttgccatacac
cctgcacgattcctgattcgcaatataattagaagaagccgttaa

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