KEGG   Kitasatospora aureofaciens: B6264_28835Help
Entry
B6264_28835       CDS       T05021                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
kau  Kitasatospora aureofaciens
Pathway
kau03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:kau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    B6264_28835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kau03400]
    B6264_28835
Enzymes [BR:kau01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     B6264_28835
DNA repair and recombination proteins [BR:kau03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     B6264_28835
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M RNA_ligase PNKP_ligase
Motif
Other DBs
NCBI-ProteinID: ARF82349
UniProt: A0A1V0VY47
LinkDB All DBs
Position
complement(6587785..6589614)
Genome map
AA seq 609 aa AA seqDB search
MPQMTVDGRTLALSHLDKVYYPRVGTLKGDVLRYYAAVHTVLLPHLRDRPVSFLRCPDGV
EAEVFVAKNPPPGTPEWVRTVDVPSTGGELRQVVLEDGAALLAVANLGCLELHVPQWHAA
APALADRLVLDLDPGEGANVLTCRAVALLLRERLAADGLSAWVKTSGSKGLHLLVPIEPT
PSATVSGYAKALAAALEVEHPDLVVHTMAKARRRGRVLVDWSQNNAKKTTAAPYTLRARP
LPTVSTPLSWGELERASGETELVFTLAELPGRLAAHGDLFAPLLDPEQARPLPAAPTARE
APAAPTARAPAPEQPRQVLQPPVEVMRPAAVTAVPPADGLGGGGVQYELKLDGFRCVAFA
RGDRPAFLQSRSGRDLAPEFPPIAAAVARLPEGLVLDAELVAWRAGRFAFEELLHTRQAR
AAAADVVLGLIAFDLLALPGRDVRRLPLTDRRRLLLAALADVPPPIQPVMATTDRTEALE
WVEQLADTGVEGLVCKAAASPYRARGAGRAWVKYRRSDTLDATVRALTGPASRPYALVLQ
LDDGRVFLTTPRLTPVQAREVAQVAGPLLGPPATDPDHGRVHPLTGPLRAELTLTGRPPT
ATFVRLRGD
NT seq 1830 nt NT seq  +upstreamnt  +downstreamnt
atgccgcagatgacggtggacggacgcaccctcgccctgtcccacctcgacaaggtgtac
tacccgcgcgtcggcaccctgaagggcgacgtgctgcgctactacgccgccgtgcacacc
gtcctgctcccccatctgcgcgaccgcccggtgtccttcctacgctgcccggacggtgtg
gaggcggaggtgttcgtcgccaagaacccgccgccgggcaccccggagtgggtgcgcacg
gtggacgtgcccagcaccggcggcgagctgcgccaggtggtgctggaggacggcgcggcg
ctgctggcggtcgccaacctgggctgcctggaactgcacgtcccgcagtggcacgccgcc
gcgccggccctggcggaccggctggtcctggaccttgatccgggcgagggcgcgaacgtc
ctcacctgccgggcggtcgcgctgctgctgcgcgagcggctggccgcggacgggctgtcg
gcctgggtgaagacctccggctccaagggcctgcacctgctggtgccgatcgagccgacg
cccagtgccacggtctccgggtacgcgaaggcgctggccgccgcgctggaggtcgagcac
ccggacctggtggtgcacaccatggccaaggcccgccgccggggccgggtgctggtcgac
tggtcgcagaacaacgccaagaagaccaccgccgctccgtacaccctgcgcgcccggcca
ctgccgacggtctccaccccgctgtcctggggcgagctcgaacgggcgagcggggagacc
gagctggtcttcacactcgccgagctgccgggacggctggcggcgcacggcgacctgttc
gcgccgctgctggaccccgagcaggcccggccgctgcccgccgcacccacggcccgggag
gcgcccgccgcacccaccgcccgggccccggccccggagcagccccggcaggtgctgcag
ccgcccgtcgaggtgatgcgccccgccgccgtcaccgccgtgccgcccgccgacgggctg
ggcgggggcggcgtgcagtacgagctgaagctggacggcttccgctgcgtcgccttcgcc
cgcggtgaccgtccggcgttcctgcagtcccgcagcggccgcgacctcgcccccgagttc
ccgccgatcgccgccgccgtcgcccggctgccggaggggctggtgctggacgccgagctg
gtcgcctggcgggccgggcggttcgccttcgaggagctgctgcacacccgccaggcccgg
gccgctgcagcggacgtggtgctcgggctgatcgccttcgacctgctcgccctgcccggc
cgcgacgtccggcgcctgccgctcaccgaccggcgccgcctgctactggccgccctggcc
gacgtcccgccgccgatccagccggtgatggccaccacggaccggacggaggcgctggag
tgggtggagcagctggccgacaccggcgtggagggcctggtctgcaaggccgcggcctcc
ccctaccgagcgcgcggcgcgggccgcgcctgggtcaagtaccggcgcagcgacaccctg
gacgccaccgtccgcgccctcaccggtccggcctcccggccgtacgcgctggtgctccaa
ctcgacgacggccgggtgttcctcaccacccccaggctcacccccgtccaggcccgcgag
gtcgcccaggtcgccgggccgttgctcgggccgcccgcaaccgaccccgaccacggccgg
gtgcacccgctcaccggcccgctgcgcgccgaactcaccctcaccgggcgcccgcccact
gccaccttcgtccggttgcgcggggactga

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