Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis): CKBE_00116
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Entry
CKBE_00116 CDS
T02427
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
kbl
Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas culicis)
Pathway
kbl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKBE_00116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kbl03400
]
CKBE_00116
DNA repair and recombination proteins [BR:
kbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKBE_00116
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKBE_00116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
AAA_21
AAA_33
AAA_14
cobW
Viral_helicase1
NACHT
DnaJ_CXXCXGXG
nSTAND3
phiKZ_IP
DUF6561
ABC_ATPase
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AFZ83305
LinkDB
All DBs
Position
120636..123416
Genome browser
AA seq
926 aa
AA seq
DB search
MSYIHIQGARTNNLKNIHIDIPHHKLVVVTGVSGSGKSSLVFDTIYSESQRKYIESLSPS
FRQFVHMLIQPDIDLIDGLSPTIAIKQKSNYKNTRNTVGTITEIYDYIRLLFAKIGTPFC
PEHNEPLLIKNISQMTDWAMSITTNNDILILSPIKKNEYVSLETICKNLLSQGFLRIYIE
NQVIEIDEAINTKELNNIDKIAVVIDRLKIKEKNKDRLSSSFDTAAKIGRGHVLVKNLDN
GNEKTFSTVHSCPICNYQINTLEPSMFNFNSSRGCCKQCNGLGTEYYFDKSTIINNNLLS
EILEIYSLNNNITLEKISEMYCLNYDESFDSIDINKKNLILSEIAIHRDLREDTNNIPKG
IINFLEDLAKKSNSKHLKTLLKKYQNIRPCAACNGTKLCLEARNVLLCNNKRTNKKNNSI
SITEIESMPIEDCFVFFKKFKKHENITSEPILKRILPRLSFLIKMGLGYLSLGRNINTIS
GGEAQRIKMSSQICSGLIGITYILDEPSQGLHKHDTKILIKALKNLRDLGNSIIVIEHDK
EIILSADWIIDMGPEGGGRGGFIIAQGTPRQIIDNPNSLTGAYLKNKNKNKVFKKTINNK
TRWLQIEKAKFNNLRSIDVSIPIGYLTCITGVSGSGKSTLVNDIIKYGITNHISNDKYCT
NRYKEIHGTEFFDYLIHINQNSIGNTANSNIATYCGIFTIIRELFSSSIEAKKRGYAPNR
FSFNIKGGRCEVCRGAGNSKVEMHFMPDIYVICEECKGKKYNRETLEIYYGGLNISDILN
LTIGEAKTFFQNIPKIINKINILADLGLSYLSLGHNINSLSEGELQRIKISIELSKQTQG
RTLYILDEPTSGLHDNDIKLLLNTIRLLIENNNTVIIVEHNIDIIKMADWIIDIGPEGGI
NGGSIVAQGTVENIIKSKASYTARYL
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgagttatattcatatacaaggtgctcgcactaataatttaaaaaatatacacattgac
ataccacaccataaattagtagttgtcactggagtatctggatctggaaaatcttcacta
gtatttgacacaatatactctgaaagtcaaagaaaatacatagagagcctgtcacctagc
tttagacaatttgtacatatgctaatacagcccgatattgatttaatagatggattatcc
cctactattgcaataaaacaaaaatcaaattataaaaacacaagaaatactgttggaaca
ataacagaaatatacgattacataagactactattcgcaaaaattggcacacctttttgt
ccagagcataatgaacctttgttaattaaaaatattagtcaaatgactgactgggctatg
tctataacaacaaataacgatatattaatattatctccaatcaagaagaatgagtatgta
tcattagaaacaatatgtaaaaatttattatcacaaggattcttgaggatatatatagaa
aatcaagttatagaaatagatgaagcaataaatactaaggaattaaataacattgacaaa
atagcagtagttatagatagactaaaaattaaagaaaaaaacaaagatcgcctatcttct
agtttcgatacagcagctaaaataggtaggggacatgtcttagtaaaaaatttagataat
gggaatgaaaagactttctcgacagtgcactcatgccctatttgtaattatcagataaat
acacttgaaccgagtatgtttaacttcaacagtagcagaggatgctgtaaacaatgtaat
ggacttggtacagaatattattttgataaatccacaattattaataataatttattatca
gaaatactagaaatatattctctaaacaataacattactctagaaaaaatatcagaaatg
tactgtttaaattatgatgaatcatttgactctattgatataaacaaaaaaaatttaata
ctaagtgaaatagcaatacatcgtgatttacgtgaagatacaaataatatacccaaaggg
ataattaattttctagaagatttagctaaaaaaagtaattcaaaacatttaaaaacatta
ttaaaaaaatatcaaaatataagaccttgtgcagcatgcaatggtactaaactatgctta
gaagctaggaatgttttattgtgcaacaataaaagaacaaataaaaaaaacaatagtatt
tcaataactgaaattgaatcaatgcctatagaagattgcttcgtgttttttaaaaaattc
aaaaaacatgaaaatataacatctgaacccatattgaagcgtatacttcctcgtctgtct
tttctaataaaaatggggctgggatacctttctctaggaagaaatataaatactatttct
ggaggagaagctcagagaattaaaatgtctagtcaaatatgctccggcttgataggaatc
acatatattctagatgaaccatctcaaggactccacaaacatgatacaaaaatacttata
aaagcattaaaaaatctcagggatctaggcaacagtataattgttatagagcatgacaaa
gaaattatattatcagcagactggattatagatatgggtccagagggaggaggaagagga
ggatttataatagctcaaggaacaccaaggcaaataatagataatcctaactcattaact
ggagcatacttaaaaaataaaaataagaataaagtttttaaaaaaactattaacaataaa
actagatggctacaaatagaaaaagcaaaatttaataatcttagatcaatagatgtgagc
ataccaataggatatttaacatgtattactggagtatctggatctggaaaatcaaccctg
gtaaatgatattataaaatatggaataacaaatcatatatctaatgataaatactgtact
aataggtataaagaaatacatgggactgagttttttgattatctaatacatataaatcag
aatagtattggcaatacagcaaatagtaatattgcaacatactgtggaatctttactata
atcagagaacttttttctagttctatagaagcaaagaaaagaggatatgctccaaataga
tttagttttaatataaaaggcggtagatgcgaggtgtgtagaggagcaggtaatagcaaa
gtagaaatgcattttatgcctgatatatatgtaatttgcgaagaatgcaaaggtaaaaaa
tataatagagaaactctagagatttactatggcggactaaatattagtgacattctcaat
cttacaataggagaagcaaaaactttttttcaaaatataccaaaaataattaataaaata
aatatacttgccgatcttggattatcatatttatcgctaggtcataatataaattcatta
tctgaaggagaattgcagagaattaaaatttctattgagttgtcaaaacaaactcaagga
aggacattgtatatcttagatgaacccacttctggactacatgataatgatattaaatta
ttattaaatacaataagacttctaattgaaaataataacactgtgataattgtagaacac
aacatagatataatcaaaatggcagattggattatagatataggcccagaaggaggaata
aatggcggatccattgtagcacaaggaactgtcgagaacataatcaaatcgaaagccagc
tatactgctaggtatctatag
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