Ktedonosporobacter rubrisoli: EPA93_41715
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Entry
EPA93_41715 CDS
T05969
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
kbs
Ktedonosporobacter rubrisoli
Pathway
kbs02020
Two-component system
kbs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kbs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EPA93_41715 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EPA93_41715 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kbs03021
]
EPA93_41715 (rpoN)
Transcription machinery [BR:
kbs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EPA93_41715 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma70_r4
Sigma54_AID
Sigma70_r4_2
Sigma70_r3
TetR_N
HTH_DeoR
CENP-B_N
DUF4164
Motif
Other DBs
NCBI-ProteinID:
QBD82154
UniProt:
A0A4P6K206
LinkDB
All DBs
Position
complement(9718880..9720340)
Genome browser
AA seq
486 aa
AA seq
DB search
MRLEPTPRTEHALRVSARLITSSTILHLASDELENAVNQEQMENPALDVIEQKVCLFCGA
PMYGHICAACGHFAQPTQPLAPLHEAPAPYESEGEPQWAYQQQTFYDIDNYGFAQVDSED
EYDPLAHISLGETLEEMLLQQLETLIAPEEAPIAEQLVGNLNERGYLEIGIEEIAEHLDV
STQRVEYVLHQLQTLEPLGIGARNLRECLLIQLEALKELKEPHPLAYALIDGYLEQLGRN
QFHEIARQLKAPEQEVRRASQYIRSTLHPYPAHLYRADTRSSRQGSGVTYIRPDVIIRKG
EIGFEVELIEEKRYNFHIETNYSVQQGSPTAELSSHEVQRYMHHHRDRARFFVDCIHRRW
QTLKHVMEIVIDHQQEFLEKGVRYLQPLTRAEVAARLNLDEGTVSRATANKYALLPNGRL
MPLSDFFDSSLSIKDILRELIQSEDPRHRLSDDELARLLNVQGIPLARRTVTKYREEMGI
GSSRER
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagaaccaacaccaagaacagaacatgccttgcgcgtcagtgcaagacttatc
acatcgagtactattttacatctggcctcggacgagcttgagaatgctgtcaaccaggag
cagatggagaatccggcgctcgatgtgattgagcaaaaagtctgtctcttttgcggagct
cctatgtatgggcacatttgcgcagcttgtggacatttcgcacaacccacgcaaccactg
gcgcctttacatgaggctcctgcaccctacgagagcgagggggaaccacaatgggcatac
cagcaacaaaccttctacgacatcgacaattatgggttcgcccaggtcgatagcgaggat
gagtatgatcctctggcccacatctctctcggcgagacgcttgaagaaatgctcttacaa
cagctagaaacgcttattgctcctgaagaggcgcccattgccgagcagctcgttggcaac
cttaacgagcgtggctatctggagattggcatcgaggagattgccgagcatcttgacgtc
tctacgcagcgcgtcgaatacgtgctccatcaattgcagaccctggagccgctgggcata
ggggctcgcaatctgcgcgaatgcctgctcatccaattagaggctctcaaggagctgaag
gagcctcatccgcttgcttatgctcttatcgatggctatcttgaacagctcgggcgcaac
caattccacgaaatcgccaggcaattgaaggcgcccgaacaagaagtcaggcgagccagc
cagtatattcgtagcaccctacatccttatccagcgcatctctacagggctgatacacga
tccagccgccagggcagcggcgtaacctatatacgccctgacgtgatcatccgcaaaggc
gagattggctttgaagtagagctgatcgaggaaaagcgctacaacttccatattgagacg
aactactcagtccagcaaggttccccaactgcggaactttccagccatgaagtgcagcgc
tatatgcaccatcaccgcgatcgagccagattctttgtggattgtattcatcgacgctgg
caaacgctcaagcatgttatggagattgtgatagatcatcagcaggagtttctagaaaag
ggtgtacgttatttacagccacttacgcgcgcagaggtcgccgcgcgcttgaatcttgat
gagggcacggttagcagggcaaccgccaataaatatgcattactgcccaatggccgcctt
atgccgctctcagatttcttcgacagctcgctcagtatcaaagatattttgcgcgaactt
atccaatccgaagatcccaggcatcgcctgagcgacgatgagttagcacgcttactcaac
gtacaggggattcctttggcccgccgaacagtcactaagtatcgcgaggagatggggatt
ggctcttcccgtgagcgctaa
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integrated database retrieval system
