KEGG   Candidatus Korarchaeum cryptofilum: Kcr_0375Help
Entry
Kcr_0375          CDS       T00668                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
kcr  Candidatus Korarchaeum cryptofilum
Pathway
kcr03030  DNA replication
kcr03410  Base excision repair
kcr03420  Nucleotide excision repair
kcr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Kcr_0375
   03410 Base excision repair
    Kcr_0375
   03420 Nucleotide excision repair
    Kcr_0375
   03430 Mismatch repair
    Kcr_0375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kcr03032]
    Kcr_0375
   03400 DNA repair and recombination proteins [BR:kcr03400]
    Kcr_0375
Enzymes [BR:kcr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Kcr_0375
    6.5.1.6  DNA ligase (ATP or NAD+)
     Kcr_0375
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Kcr_0375
DNA replication proteins [BR:kcr03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Kcr_0375
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Kcr_0375
DNA repair and recombination proteins [BR:kcr03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Kcr_0375
   NER (nucleotide excision repair)
    Other NER factors
     Kcr_0375
   MMR (mismatch excision repair)
    Other MMR factors
     Kcr_0375
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2 Branch
Motif
Other DBs
NCBI-ProteinID: ACB07131
UniProt: B1L3V2
LinkDB All DBs
Position
complement(384232..386016)
Genome map
AA seq 594 aa AA seqDB search
MNFIDVAKIYEKIEATTGRLEMIDYLKNLFLSTPPEILDKIVYLTLGNIAASFEGIELGV
GEKLFLRALSLATGIPQERLEEEYPKLGDIGKLAEWAVSKKAAQSFFTEDLTVERVFDTL
SKVARATGEGAQDLKVRLIAGILSDAKPLEARYIARIVTEKLRLGVRDMTVLDALSEAFL
KGRAYRDKLERKYNIYPDIGKIAKVVAEKGIKGLDEITITLGIPVRPMLAQRLRSAEEIM
EKIGPRIFAEFKYDGERMQIHVWKDGKVKIFSRRLEDITEPYPDVREYVSKAVEGHEVVL
DCETVAINPDTGEILPFQELMHRRRKYGVEEAMKTYPTVTYAFDLLYLDGRELLDEQLDD
RRKILKEILKENEKARLVQYEEIDGNVEELERFFEHAVEMGTEGLVVKDPKSIYQAGVRG
WSWIKLKRSYISKMIEPVDLVVVGAFWGKGKRAGTYGALLMAAYSPEEDVFKTVCKMGSG
FTDEELARMPKLLEDYKIDHKHPSVISNIEADVYFVPVKVAQVLGDEITLSPTHTCGWNK
VRKNAGLAIRFPRFMGWRDDKGPQDATTEEEIIEMYKEQLKVVEVEETKSEEEA
NT seq 1785 nt NT seq  +upstreamnt  +downstreamnt
gtgaatttcatagatgtggcgaaaatatatgagaagatagaggcaactacaggaaggcta
gagatgatagattatctgaagaaccttttcctcagcacacctccggagatattggataag
atagtctatctcaccctagggaatatagcagcctctttcgagggcatcgagctcggggtc
ggggagaagctcttcctcagggccctctccttggccaccggcatcccccaggagaggctg
gaggaggagtaccctaagctcggggatatagggaagttagctgagtgggcagtcagtaag
aaagcggctcaatcattcttcaccgaagatctcactgtggagagggtcttcgatactctg
agcaaggtagcgagagctactggggagggagcccaggacctgaaggtgaggctgatagct
gggattttgagcgatgctaagcctctggaagctaggtacatagctaggatagttacagag
aagcttaggcttggagtgagggatatgaccgtcctggatgctctatcagaggctttcctc
aaggggagggcttacagggataagctggagaggaagtacaacatatatccggatataggg
aagatagctaaggtcgtcgcggaaaaggggattaagggcttagatgaaataaccataact
ctcggaatcccggtcaggcccatgctagctcagaggctgaggtcggctgaggagataatg
gagaagatcggtcccaggatattcgcggagttcaagtacgatggggagaggatgcagatc
cacgtttggaaggatgggaaggtgaagatattctccagaaggctggaggacataaccgag
ccttatccagatgtgagggaatacgtttctaaggccgttgaggggcatgaagtggttctg
gattgcgagacagttgccataaatcccgataccggtgagatactccccttccaagagctg
atgcacaggaggaggaagtacggtgtcgaggaggcgatgaaaacctatcccaccgtgacc
tacgcattcgacctgctctacttagatggaagggagctcttagatgagcagctagatgat
aggaggaagatactgaaggagatattgaaggagaacgagaaagctaggttagtccagtat
gaggagatagatggtaatgttgaggagcttgagaggttcttcgagcatgctgttgagatg
gggaccgagggcttggtagttaaggatccgaaatcgatatatcaggctggagttagggga
tggtcctggataaagctgaagaggagttacataagcaagatgatagagcccgtcgatcta
gtagttgtaggggctttctgggggaaggggaagagagctggaacttatggagctctccta
atggcagcttactcacccgaggaggacgtcttcaagactgtatgcaagatgggatccggt
ttcacggatgaggaactcgctagaatgcctaaactgctagaagattacaagatagatcac
aagcacccgagcgtcatatccaatatagaggccgatgtttacttcgtccccgtcaaggta
gctcaggtcctgggggatgagataacgcttagtcccactcatacgtgcggatggaataaa
gtgaggaagaacgccggcctcgctataaggttccccaggttcatgggctggagggatgat
aaggggcctcaggacgcgacgactgaggaggagataatagagatgtataaggagcagctg
aaagtggttgaagttgaggaaactaagtccgaggaggaagcttga

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