Candidatus Kinetoplastibacterium crithidii TCC036E: CDEE_0482
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Entry
CDEE_0482 CDS
T02464
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kct
Candidatus Kinetoplastibacterium crithidii TCC036E
Pathway
kct03420
Nucleotide excision repair
kct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDEE_0482
03430 Mismatch repair
CDEE_0482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kct03400
]
CDEE_0482
Enzymes [BR:
kct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDEE_0482
DNA repair and recombination proteins [BR:
kct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDEE_0482
MMR (mismatch excision repair)
Other MMR factors
CDEE_0482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
DnaB_2
Motif
Other DBs
NCBI-ProteinID:
AGF47525
UniProt:
M1M5U9
LinkDB
All DBs
Position
269484..271736
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AA seq
750 aa
AA seq
DB search
MNLDDLNNAQRKAVTTDNSHSLVLAGAGSGKTKVLSSRIAWLINTGQASFNEVLAVTFTN
KAAREMVSRISMMLDRDMKGFWIGTFHGLCHKMLRLNWREANLIQNFQIIDMSDQLSLIK
RLMKSANVNESKYSARDLQKIINSYKEKGLRSNEIDVYDSYNKYIAEFYHLYEHQCIRDG
LLDFAELLLKSYDLLKNNQTIRNYYQERFKYILVDEFQDTNSLQYGWLRLLIGNSTSVFA
VGDDDQSIYAFRGANIDNMSLFDKEYAKGNIVRLEQNYRSMGHILGAANSLIRYNNGRLG
KKLWTQEGDGEKVLIVEKHNDLLESQWIVDEIKNIVKNGIKQDDIAVLYRSNAQSRVLEH
ALFLSGISYKVYGGLRFFERQEIKNVLAYLRLIVNRNDDSAWLRSVNFPIRGIGTRTIES
LFEITKNKNISLYDAVAYHSGRSKNNLLMFNNIISTLEESSRKLTLVQLIEHVLEFTGIN
AFYKNEEETDRLDNLKELVTAATIFSGENNFSEIPASLLIDDLKENLDVSLNNNIYLEQE
KITPLLSFLSHASLEAGDNQSESEQSSVQLMTVHAAKGLEFKVVFITGVEEGLFPHENSM
SDNSSIEEERRLMYVAITRARKKLYITMANSRMLRGQVRYSVKSRFISEVGEGNVIFVKN
KEQILPNNYLKSNSRFTSNSHQQSNKLSSGNTNFVDINGKKFVIGQNVKHKKFGDGTIIK
LIGHGEESQAQISFNNCGIKTIMLGIARFE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagatgacttaaataatgctcaaagaaaggctgtgactacggacaattcacat
tctttggtgttggctggtgcaggtagtggtaaaactaaggttctttcttctagaatagcc
tggcttatcaatactggtcaggcatcttttaatgaggttttggctgttacttttactaac
aaggccgctcgtgagatggtgtctagaatatctatgatgttggatagggatatgaaaggt
ttttggattggtacctttcatgggttgtgtcataaaatgcttagattgaattggcgcgag
gctaatttaatacaaaatttccaaattatagatatgtcagatcagctatctttgataaag
cgtttgatgaaatctgcaaatgttaatgaatctaagtattcagcaagggatctacaaaaa
attataaattcttataaggaaaagggtcttagatctaatgagatagatgtttatgattca
tacaataaatatattgctgagttttaccatctttatgagcatcaatgtattcgtgatggt
ttgcttgattttgcagaattgttgctgaaatcctatgatcttttaaaaaataatcaaaca
attagaaattattaccaagaacgttttaagtatattttagtagatgaatttcaggatact
aatagcttgcagtatgggtggttacgtttattgataggtaattctacttcagtatttgct
gtaggtgatgatgatcaatctatttatgcatttcgtggtgcaaatatagataatatgtct
ttatttgataaggaatatgccaaaggtaatatagtccgcttggaacaaaattatagatcc
atgggccatatattaggtgcagctaattctttgattaggtataacaatgggcgtttaggt
aagaaattatggacgcaagaaggtgatggtgaaaaagtattaatagttgaaaaacacaat
gatctattagagtcacaatggatagttgatgaaattaaaaatattgttaaaaatggtatt
aaacaagatgatatagctgttttatacagaagtaatgctcagtcaagagttttagagcat
gctttatttttaagtggtatttcttataaagtttatggtggattaagattttttgaaaga
caagaaattaagaatgtattagcttatttgaggcttattgtaaatcgtaatgatgactct
gcttggcttagatcagttaattttccaattagaggaataggaactcgtactatagaatca
ttattcgaaataacaaaaaataagaatattagtttgtatgatgctgttgcatatcattca
ggtagaagtaaaaataatttattgatgtttaataatattatttctactttagaagagtct
tcaagaaaattaactcttgttcaattaatagaacatgttttagaatttactgggattaat
gctttttataaaaatgaagaagaaactgatcgtttggataatttaaaggagttagttaca
gccgctactattttttcaggtgaaaataatttttctgaaattcctgcaagtcttttgatt
gatgatttaaaagaaaatcttgatgtaagtttgaacaataatatttacctagaacaagag
aaaattactcctttgctatcttttttatcacatgcttctttagaagctggagataaccaa
tctgaatcagagcaatcatctgtgcaattaatgacggttcatgctgcaaaaggattggaa
tttaaggttgtttttattacaggtgttgaggaaggtttatttccacatgaaaatagtatg
tctgacaattctagtattgaagaagaaagacgtttaatgtatgttgctattacaagagct
agaaaaaaattatatataactatggcaaatagtcgtatgttaagaggtcaagtaagatat
tctgttaaatctcgttttatttctgaggttggtgagggtaatgtaatttttgtaaaaaat
aaagagcaaattttaccaaataattatttaaaaagtaattctagatttacttcgaattct
catcaacagtcaaataagttatccagtggtaatacgaattttgttgatattaatggtaag
aagtttgtaattggacaaaatgtaaaacataaaaaatttggtgatggtacaattattaag
ttaattggtcatggagaggaatcacaagcccagataagctttaataattgtggtataaag
actattatgttaggtatagctaggtttgaataa
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