Dokdonia sp. 4H-3-7-5: Krodi_0184
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Entry
Krodi_0184 CDS
T01484
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00300
Lysine biosynthesis
kdi00470
D-Amino acid metabolism
kdi01100
Metabolic pathways
kdi01110
Biosynthesis of secondary metabolites
kdi01120
Microbial metabolism in diverse environments
kdi01230
Biosynthesis of amino acids
Module
kdi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Krodi_0184
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Krodi_0184
Enzymes [BR:
kdi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Krodi_0184
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Plk4_PB2
Motif
Other DBs
NCBI-ProteinID:
AEE18172
UniProt:
F4AXQ5
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All DBs
Position
complement(218689..219465)
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AA seq
258 aa
AA seq
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MTIPFSKYQGTGNDFVIIDNRTQYFPKDDTKLISKLCDRKFGIGADGLMLLENHPSADFR
MVYYNADGNESSMCGNGGRCLVAFAKALSIIENNATFEAIDGLHEASIEGDIVQLKMQDV
SKIKKEPTYTFLDTGSPHHIAMVDDVEKVNVKAEGAALRYGSLYGEAGSNINFVQQLDNA
HFAVRTYERGVEDETLSCGTGVTAVAIAAHTNGLTTSNKVALDVQGGKLSVQFEKTNDGY
SNIYLIGPATFVFKGEWQ
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcccattttcaaaatatcaaggtactggcaatgattttgtaatcatagataac
cgtactcaatactttcccaaagatgataccaaactcatctcaaagctctgtgacagaaag
tttggcataggagcagatggattaatgctgttagaaaaccatccttcggcagattttaga
atggtgtactataatgcagatggtaatgaaagtagtatgtgtggtaatggtggacgttgt
ttggtagctttcgcgaaagcgttatctattatagaaaacaacgcaacctttgaagcgata
gatggtttacacgaggcaagcatagaaggtgatatcgtgcagctgaaaatgcaagatgta
tctaaaattaagaaagaacctacatatacttttttagatacagggtcaccacatcacatt
gcaatggtagacgatgtagaaaaagtaaacgtaaaagccgaaggtgcagcattgcgctac
ggtagtttatatggagaagcgggtagtaacatcaattttgtacagcaattggataatgct
cattttgcagtgcgcacctatgagcgtggagtagaggatgaaacgttgagctgtgggaca
ggagtgacagctgttgcaatcgcagcacatacaaatggcttaaccactagcaataaagta
gcgctagatgtacaaggtgggaaactgtctgtacagtttgagaaaactaatgatgggtat
tctaatatctatttaataggtcctgcaacatttgtttttaaaggagaatggcaatga
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