Dokdonia sp. 4H-3-7-5: Krodi_0502
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Entry
Krodi_0502 CDS
T01484
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00730
Thiamine metabolism
kdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Krodi_0502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kdi03009
]
Krodi_0502
Enzymes [BR:
kdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Krodi_0502
Ribosome biogenesis [BR:
kdi03009
]
Prokaryotic type
GTPases
Krodi_0502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
RsgA_N
MMR_HSR1
MMR_HSR1_Xtn
GTP_EFTU
AAA_29
FeoB_N
ABC_tran
Septin
Ras
AAA_7
eIF-1a
AAA_16
ATP-synt_ab
AAA_22
APS_kinase
AIG1
NTPase_1
AAA
AAA_23
RNA_helicase
PduV-EutP
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
AEE18487
UniProt:
F4AYM0
LinkDB
All DBs
Position
complement(574991..575947)
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AA seq
318 aa
AA seq
DB search
MTGTVYKSTGSWYTVKADDGQWFECRIKGKFRIQGIKSTNPVSVGDVVDFDLDTKSDVET
GVITKIHDRDNYIVRKSVNLSKQTHIIASNVDTVFLLVTLNNPPTFTAFIDRFLVTAEAY
HIKAVLLFNKIDTYNEEEIMEIKYLAAMYREIGYECVGISAITGKNIDTVKEMMMGKTCM
FTGHSGVGKSTLVNAIEPTLDLKTKQISVQHSQGQHTTTFAEMFDLHFDARIIDTPGIKG
FGIVDMEREEIGDYFPEFFALKSECKFNNCLHLEEPKCAVKEALDNDELHWSRYKSYTQM
LEGDDEQHYRKDHYPEEQ
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaactgtatataaatctactggaagttggtacaccgtaaaagcggatgacggc
cagtggtttgaatgtagaataaaaggaaaattccgtattcaaggaattaagagtacaaac
ccagtttcggtaggtgatgttgtagattttgatcttgacaccaaaagtgatgtagagaca
ggcgtgattacaaaaatacacgatagagataactacattgtacgtaagtctgtaaacctc
tctaaacaaactcatatcattgcaagtaacgtagacaccgtgttcttactagtgacactc
aataatccgcctacttttacggcttttatagatcgttttctggtaactgcagaggcttat
catattaaagcggttttactttttaataagattgatacgtataacgaagaggaaatcatg
gagataaaatatcttgcggcaatgtatcgtgagatagggtatgagtgtgtaggcatttcg
gcaattacaggaaagaatatcgatactgtaaaggagatgatgatgggtaagacgtgtatg
tttacaggtcattctggagtaggaaaatctacgctggtaaatgctatcgaacctacctta
gatctcaaaacaaagcaaattagcgtacagcacagtcaaggacaacacacgacaactttt
gcagagatgtttgatctacattttgacgcacgaattatagatactcctggaattaaaggt
tttggaattgtagatatggaacgtgaagaaataggagactattttcctgagtttttcgct
ttaaaaagcgagtgtaaattcaataattgtttacacctcgaagaacctaaatgtgctgta
aaagaagcgctagataatgatgaactccactggtcgcgttataaaagttatacccaaatg
ctagaaggggatgacgaacagcattacagaaaagatcactacccagaagagcaataa
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