Kocuria flava: AS188_13455
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Entry
AS188_13455 CDS
T04206
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
kfv
Kocuria flava
Pathway
kfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AS188_13455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kfv03400
]
AS188_13455
Enzymes [BR:
kfv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
AS188_13455
DNA repair and recombination proteins [BR:
kfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AS188_13455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALU40586
UniProt:
A0A0U3G724
LinkDB
All DBs
Position
complement(3017234..3017866)
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AA seq
210 aa
AA seq
DB search
MASPRAPRPGRPSRAQLEAARGTTLPDLLGPGLRLLVCGINPSLWAAATQAHFARPGNRF
WPALHEARLTGHLVDCSAGMTAADRAHVVARGIGITNLVERATARADELDPQEFVAGRER
LARIVAEHRPAVVAVAGVTAYRHAFAEPRAVLGPQEQLLEGARLWALPSPSGLNAHASRA
DLAAAFAAAGRAAGLLPGSPAAGGDGTTPG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccgcgcgctccccgtcccggccggccgtcccgtgcgcagctcgaggcggcc
cgcgggaccacgctccccgacctgctcggccccggtctgcggctgctggtgtgcgggatc
aacccgagcctgtgggccgccgcgacgcaggcgcacttcgcccgccccggcaaccggttc
tggccggcgctgcacgaggcccggctcaccggccacctcgtcgactgctcggccgggatg
accgcggccgaccgggcgcacgtggtggcccgcggcatcgggatcaccaacctcgtggag
cgggccacggcgcgggcggacgagctggacccgcaggagttcgtggcgggccgcgagcgc
ctggcccgcatcgtggcggagcaccgcccggccgtcgtggcggtcgccggcgtgacggcc
taccggcacgccttcgccgagccgagggccgtgctgggcccgcaggagcagctgctggag
ggcgcccggctgtgggcgctgcccagcccgagcgggctcaacgcgcacgcgagccgggcg
gatctcgcggcggcgttcgccgcggcgggccgtgcggccggcctgctgcccgggagcccg
gctgccggcggcgacgggacgacccccgggtag
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