Kluyvera intermedia: NCTC12125_03169
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Entry
NCTC12125_03169 CDS
T06042
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
kie
Kluyvera intermedia
Pathway
kie03030
DNA replication
kie03430
Mismatch repair
kie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12125_03169 (holC)
03430 Mismatch repair
NCTC12125_03169 (holC)
03440 Homologous recombination
NCTC12125_03169 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kie03032
]
NCTC12125_03169 (holC)
03400 DNA repair and recombination proteins [BR:
kie03400
]
NCTC12125_03169 (holC)
Enzymes [BR:
kie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12125_03169 (holC)
DNA replication proteins [BR:
kie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12125_03169 (holC)
DNA repair and recombination proteins [BR:
kie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12125_03169 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
VDZ85015
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All DBs
Position
1:2914528..2914971
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AA seq
147 aa
AA seq
DB search
MKNATFYILDNDTTVDDLSAVEQLVCEIAAERWRAGKRVLIACEDEQQAVRLDEALWTRP
PESFVPHNLAGEGPRGGAPVEIAWPAKRNSSPRDILISLRVNFADFATAFTEVVDFVPYE
ETLKQLARDRYKAYRVAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgcaacgttctatattctggacaatgacaccaccgtcgacgacctcagcgcc
gtcgagcagctagtgtgtgaaattgccgcagaacgttggcgtgcgggcaagcgtgtgttg
attgcctgtgaagacgagcagcaggccgtgcgcctggatgaagcgctgtggacgcgtcca
ccggaaagctttgtaccgcataatctggcgggcgaaggtccgcgtggcggtgcgccggtt
gagattgcctggcctgctaaacgtaacagcagcccacgcgatatactgatcagtctgcgg
gtaaactttgcagattttgccaccgctttcacagaagtggtagacttcgtcccttacgaa
gaaactctaaaacaactcgcacgcgatcgctacaaagcttaccgcgtggctggttttaac
ctgaatacggcaacctggaaataa
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