Pantoea rwandensis: LH22_03310
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Entry
LH22_03310 CDS
T03331
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
kln
Pantoea rwandensis
Pathway
kln02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LH22_03310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kln02000
]
LH22_03310
Transporters [BR:
kln02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LH22_03310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AIR84534
LinkDB
All DBs
Position
complement(729734..731329)
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AA seq
531 aa
AA seq
DB search
MVTRRRFLAGCAAVPAFSYLSLNTAFADTPPSMFVMAMQLDNITSLDPHESFEATGGQIC
GNMYQRLVTPDPQKADKVIGQLAKSWDVSSDNSTYTFHLDPAAKFADGTALTAEDVAYSI
ERIVKLDKSPAFIINQFGFTKDNVTQLVTAKDAHTLEMKLGAPAAETFLLYCLSATVGSI
VSKKACEANQQNNDFGNAWLKQHSAGSGAFTLRTWKASETVILELSPQYAAQSKIKRVIL
KHITDPAAQALMVKKGDVDAAYDLTTEQLLQVKNDSNVSLVNQSLSAIMLMSCNTNNEYL
KKPQVWQALKWALDYDSIQKNILSMSFITHQSFLPSGFPAALDDMPFHKDVAKAKSLLAE
AGYPNGFEITLDHYSMQPYPDIAQAIQTQLGAIGIKVSLIAAENRQVLTKMRARQHQLAL
TVWGADYFDPNSNTEAFCVNTDNSENARSRTLAWRCSWSDEEFNKLTEQALHEPDPAKRI
ALYQQIQQLGREKSPFIYMMQKTKNVACGKNIADVHMTVLEQWPYDQVKKA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccagaagacgttttctcgcaggatgcgccgccgtccctgctttttcctatctg
agtctcaataccgccttcgctgatacgccaccgagtatgttcgtgatggcgatgcagttg
gacaacatcaccagcctcgacccacacgaaagctttgaagccaccggcggccagatctgc
ggcaacatgtaccagcgcctggtcacgcccgatccacaaaaagccgacaaggtgatcggc
cagctggcaaaaagctgggatgtcagcagtgataacagcacctataccttccacctcgac
ccggcagcgaaattcgccgatggcacagcgctcaccgcagaagatgtcgcctattcgatt
gaacgtatcgtcaaactggataaaagcccggcctttatcatcaaccagtttggcttcacc
aaagacaatgtgacgcagttggtcaccgcgaaagatgcgcataccctggagatgaaactg
ggtgcgccagcagccgaaaccttcctgctgtattgcctctccgccaccgtcggcagcatc
gtgtcgaagaaagcctgtgaagccaaccagcagaacaacgacttcggtaatgcgtggctg
aaacagcacagcgccggctcgggcgccttcaccctgcgcacctggaaagccagcgaaacg
gtgattctggaactgagcccgcaatatgctgcgcagagcaagattaagcgcgtgatcctg
aagcacatcaccgatccagcagcccaggcgttgatggtgaagaaaggggatgtcgatgcg
gcctacgatctcaccaccgagcagctgttgcaggtgaagaacgacagcaacgtgtcgctg
gtcaatcagtcgctgtcagccatcatgctgatgtcatgcaacaccaataacgaatacctg
aaaaagccgcaggtgtggcaagccctgaagtgggcgctggactacgacagcatccagaag
aacattctgtcgatgagctttattacccatcaaagcttcctgccaagcggcttcccggcg
gcattggacgacatgccgttccataaagacgtggcaaaagctaagtcgctgctggcggag
gcgggttatcccaatggattcgagatcaccctcgaccactactcaatgcagccgtatccc
gatattgctcaggcgatccagacccaactgggcgccattggcatcaaagtgtcgttgatt
gccgccgagaaccgtcaggtgttaaccaagatgcgtgcgcgccagcatcaactggcgctg
accgtatggggcgcggactatttcgatcctaactccaacaccgaagccttctgtgtgaat
accgataacagcgaaaatgcccgcagccgcacgctggcatggcgctgcagctggtcagat
gaagagttcaataaactcaccgagcaggcgctgcacgaacccgatccggcgaagcgtatt
gcgctctatcagcagattcagcaactgggccgcgagaaaagtccgttcatctacatgatg
cagaagaccaagaatgtcgcctgcggcaaaaacatcgctgatgtgcacatgacggtgctg
gagcaatggccatacgatcaggtgaaaaaagcctga
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