Kryptolebias marmoratus (mangrove rivulus): 108232715
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Entry
108232715 CDS
T05608
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108232715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108232715
04121 Ubiquitin system [BR:
kmr04121
]
108232715
03036 Chromosome and associated proteins [BR:
kmr03036
]
108232715
Enzymes [BR:
kmr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
108232715
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
108232715
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108232715
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
108232715
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
108232715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
Motif
Other DBs
NCBI-GeneID:
108232715
NCBI-ProteinID:
XP_017266183
UniProt:
A0A3Q3FB39
LinkDB
All DBs
Position
LG14:17525418..17544703
Genome browser
AA seq
1386 aa
AA seq
DB search
MAQSADACAESGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLASDGYDADFVHIM
EGKDFTYEYVQREALRTPLIFKETDELGIRMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPKVVDQVDWVDNMWPPDL
KQSQTEATNIISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPADTLVFGG
NILHSFNIPMQFTIHEIENRTKVHSKFRFPFYYEICWYVLERYLNCLTKRSYLIQEIQRE
PVDDEAKAKTESPSSDSRSRDTNEDSCGPHVRDDQEEKSDRAAEDGSRSPDNAKAPLLKS
VLSVDSEDSCNPSSTSLDFPKTPSDSPASESPSRWTHLTQFELVGLRTLIEKLESLPENK
KCAPVGIENPQALLEDMKAVLKEHADDDPKLAITGVPVVFWPKKSLKPRPPNRSKPKMAA
SPASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMR
QCIAPVLPHTAVCLICGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLQVKDSNGLV
NDELPNCWECPKCNHAGKTGKATKQKRGPGFKYASNLPGSLLKEPRLIRDPKEEPDPLAV
APSPVAALTTPSAVKRKAEREAVPKRNDEEPPKKRPPLLSLDSVPRARLDDNPLRKKRKL
FDTNEEPVLVKKKKKLSKPDDPFSLKLLRHIKAENDHGDEDEEQEEHEEDGLTPDRTHFR
ERSEYDDEAQEEDTEEEENVSKGRDSSAEDKAKVLISPLLRTSSARESDHSSSNSPRAGP
SSESGDVHERSAAQLKARHQRRRLSNKGASKEFSPELIKTEDLKKHAAERTENNSAAHHR
RQLKNEDPVTNQNCKPLKTEDSATNPGRRALKTEDDVVNHHRQPLKAEDCLTNQNHSAVK
QEPQSDADEQKPRWPLNNGSSDLGDWLRHRGREVNGMPRAYSPLSWNRSPPICPRPLPCR
SPPKCIQMERHVIRPPPISPPPDRLSLNDGEAHVMRRETWLKVFSHLTHKDLCICMRVCR
TWNRWCCDKRLWKHISLNRCKSITPLMLSGIIRRQPVALDLSWTNISKKQLSWLINRLPG
LRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDSQMRDLLSPPTDNRPGQLDNRS
KLRNVEDLRLAGLDITDTSLRLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAGTTTRDSL
TDINLSVCNRVTDQSLAFFKRCGSICHIDLRYCKQVSREGCDRFVAEMSVSVQFELIEDK
LLQRIS
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtccgcggacgcctgtgcagaatccggacggaggctgcgctccatctgccgg
aggatgtacgacgagaacgaggacctgtccgacgtggaggagatcgccaacatcaggggc
ttcagcgtggaggagaagctcgccagcgacggctacgacgcagactttgtccacatcatg
gagggcaaagacttcacctatgaatatgtgcagagggaggccctcaggaccccgctcatt
ttcaaggagacagatgagttggggatcagaatgcccgatccggagtttaccgtcagcgaa
ataaaaggacttgttggcagccggcgctccgtggacgtcatggacgtgagcactcagaag
ggctctgaaatgagcatggctcagtttgtccgctactacgagacgccagaggaagagcgg
gacaagctctttaacgtcatcagcctggagttcagccacacgaagctggagaacctcatc
aagcggcctaaagtggtggatcaggtggactgggtggacaacatgtggcctcctgacctg
aaacaaagccaaacagaagccactaacattatttcagagatgaagtaccccaaggtgcag
aggtattgtttgatgagcgtgaaaggctgctacacagacttccacatcgactttggggga
acctctgtttggtatcacgtgttcaagggacagaaagtgttctggctcgtgcctccaacc
ccacacaacctggccctgtacgaggactgggtcctgtcaggcaagcagagcgacatcttc
ctgggagaccgagccgacggatgccagagagtcgagctcaaacaaggatacaccttcttc
ataccgtctggttggattcatgccgtctacaccccggcggacacgttggtgttcggaggc
aacattctgcacagcttcaacattcctatgcagttcactatccatgagatcgaaaacagg
acgaaggttcattccaagtttcggtttcccttttactacgagatatgctggtacgtcctg
gagcggtacctgaactgtttgactaagaggtcctaccttattcaggagatccagagggag
cccgtcgacgatgaagcgaaggcaaagacagagagcccttcctctgactccaggagtcgg
gacacaaatgaggattcgtgcggacctcatgtcagggacgaccaggaggagaaatccgac
cgggcagccgaggacggctcccgctcgcccgataacgccaaggccccgctcctcaaatcg
gttttatccgtcgactccgaggacagctgcaaccccagctccacctcgctggatttcccc
aaaaccccctcggactctccggcgtcggagtctccgagcaggtggactcacctgacccaa
ttcgagctggtcgggctcaggacgctgatcgagaagctggagtcactgcccgagaacaag
aaatgcgccccagtgggaatagagaaccctcaagctctcctggaggatatgaaggccgtg
ttgaaggaacacgccgacgatgacccaaagttagccatcactggagttcctgtggtgttc
tggccaaagaaaagcctgaagcctcggcctcccaaccggtcgaaacctaaaatggcagca
tctcctgcgtcggcggtcaagctgtcggccagccggggaacatctggtgccaggaggagg
aggacgcgctgtcgaaagtgcgaggcgtgcctgcgcaccgagtgcggcgagtgccacttc
tgcaaagacatgaagaagttcggcgggccgggccgcatgaagcagtcctgcatcatgagg
cagtgcatcgctcctgttttgccccacacagccgtgtgtctcatctgtggcgaggctgga
aaagaggacacggtggaggacgaggaggagaagtttaacctgatgctcatggagtgctcc
atctgtaatgagattgttcatcctaactgtctccaggtcaaagattcgaacggattggtc
aacgacgagctgccgaactgctgggagtgccccaagtgtaaccacgcaggaaaaactggg
aaagccacaaagcaaaaaagggggccaggctttaagtacgcgtcaaacctccccggctcc
ctccttaaggagccgcgcttgatccgggatccgaaggaggagcccgaccctctcgccgtg
gcgccgtcgcccgttgccgctctgacgaccccgtctgcggtgaaaagaaaggcggagcgg
gaagccgtccccaagaggaacgacgaggagcctccgaagaaacggccccccctgctgtcc
ctggacagcgtgccgcgagcaagactcgatgacaatccgctcaggaaaaaacggaaactg
tttgacaccaacgaggaacctgtcttagtgaaaaagaagaaaaagctctcgaaaccagac
gatccgttcagcttgaagctgttgcggcacatcaaggccgagaacgatcatggcgacgaa
gatgaggagcaggaggagcacgaagaagacgggctaaccccggaccggacgcacttcagg
gagagaagcgagtacgacgatgaggcgcaggaggaggatacagaggaagaggagaatgtc
tcaaaggggagagacagcagtgcggaggacaaagccaaggtgctgataagtcccctgctg
agaacgtcctcggccagagaaagcgatcattcgtcgtccaactcccccagagccggaccc
agcagcgagtcgggagacgtccacgagcggagcgccgctcagctcaaagctcgccaccag
cgccgacgtctttccaacaaaggggcgagcaaagaattcagcccggagctcatcaagaca
gaggacttgaaaaagcacgctgcagagaggacggagaacaactcggccgctcaccatcgc
aggcagctgaagaatgaggaccccgtgaccaatcagaactgtaaaccactaaaaacagag
gactcagccacgaatccgggccgtagagccctgaaaacggaggacgatgtggtgaatcac
cacagacagccgctgaaagcagaggactgtctgaccaatcagaaccacagtgcggtgaag
caggaacctcagagcgacgcggacgagcagaagcccaggtggcctctcaacaacggcagc
agcgatctgggtgactggctgaggcacagggggcgggaggtgaacgggatgccgcgggcc
tactccccgctcagctggaacagaagcccgccgatctgcccccgcccgctcccctgccgg
tcgccgcccaaatgcatccaaatggagcgccacgtgatccgacccccgcccatcagcccc
ccgcccgaccgcctgtcgctgaacgacggcgaggcgcacgtgatgcggcgagagacgtgg
ctgaaagtcttcagccacctgactcacaaagatctctgcatctgcatgcgggtgtgccgg
acgtggaacaggtggtgctgtgacaaaaggctctggaagcacatcagtctgaaccgctgt
aagtcgatcacacctctcatgctgagcggcatcatccggagacagccagtagcgctggac
ctcagctggaccaacatttccaagaaacagctcagctggctcatcaacagacttcctggt
ctgcgggtgctgctcctgtcagggtgctcctgggtggccgtctctgctctctgcacgtcc
agctgtcctctcctgcgaacgctggacgttcagtgggtcgaaggactgaaggactcccag
atgagagacttgctgtcgccgcccacggacaacaggccaggtcagttagacaacaggagc
aagctgcgtaacgtggaggacctgcgcctggcggggttggacatcacggacacgtctctg
cgcctcatcattcgctacatgcccctgttatctaagctggacctgagctactgtaaccac
gtcacggatcagtctgtcaacatcctgactgctgcagggacgacgaccagagactccctc
accgacatcaacctgtcagtctgcaaccgggtcaccgaccagtcgctggccttcttcaaa
cgctgcgggagcatctgccacatcgacctgcgctactgcaagcaggtgagcagggagggc
tgcgaccgcttcgtcgccgaaatgtctgtcagcgttcagttcgagctgatcgaggacaag
ctgctgcagagaatcagttag
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integrated database retrieval system
