Kryptolebias marmoratus (mangrove rivulus): 108234793
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Entry
108234793 CDS
T05608
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108234793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108234793
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108234793
REST complex
108234793
Heterochromatin formation proteins
Other heterochromatin formation proteins
108234793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
BTD
Motif
Other DBs
NCBI-GeneID:
108234793
NCBI-ProteinID:
XP_017269746
UniProt:
A0A3Q2ZGM1
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All DBs
Position
LG15:complement(24478212..24493493)
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AA seq
1289 aa
AA seq
DB search
MKRRAEDQEPIFTLQQQRRPPVQGIAESFQHRALAPAPAAVEAPAENMQPSTGIQYSLPQ
GYQVPAMPQSTSGHGHNSTTPHISPHAHSLAVQSQSPAVVQGHVHPPAPMASAQGQQQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGVSVQNIPTSGASSQLSSHHQHQS
LPQTALHTTSTPPLATQPALNKTSKPIQSPAHTPTSQPNPSIPAYASPRSPSVQPHTPVS
STPSSGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGG
NYTPALTEQEVYTQVARLFKNQEDLLSEFGQFLPDANSSMLLGKSTPDRAESVRNDHGPT
VKRPSLNNKQRLNQNGLPIRRPAGVGATPPPKKKSLVIAKTHGMTEVSKLSTSTETMFFE
KVKKALRSSEAYDNFLRCLHIFNQEVISRTELVQLVIPFLGKFPELFTWFKNFLGYRESS
HGESSHAESLPKERSTEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCREVLND
TWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDIVLETNLATIRALETVQRRLSRM
SAEEQVRFRLDNTMGGSSEVIHRKAIQRIYGDKAPDIIDGLKRNPAVSVPIVLKRLKMKE
EEWKEAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYEDRQEQ
ASEENATPPPSGPHVTLTYDDSQILEDAAGLIIHHVKRQVGIQKEDKFKIKQIIHHFIPD
LLFARRGELSDLEEEEEEEEEDMETNQDSPKKHNGLPGRSPSKSKLLFGSTAAQKLRGTD
DAYNLFFVNNYWYVFFRLHHILCSRLLRIYGQAEKQIEEDAHEREWEREVLGLKKEKNEN
PAIQLKMKEPMEVDVDEYYSVFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYIAFTMDKL
IQSIVRQLQHLVTDDICARVTDMYLSESASKATGGTTSTQTCRAAAEGTYQRKAEQLMSD
ENCFKLMFLKNRGSVSLALELLDTEEENSDEPADAEKWSDYVSRYLTSDSASPELREHLA
QKPVFLPRNLRRIRKCQRGWEQLQQERITKGSSDKSQDSSSELKMKCMFKLNSYKMVYVC
KSEDYMYRHTALTRAHQSHQQVNTRLHRRFQALLDDWAKTHVTSEMSANTQKWLMGDGQE
GLLSCTTTCCPEVLHYLNINKYRVKYRTL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgtgcagaagaccaagagccgatattcaccctacagcaacaacgtcgcccc
ccagttcagggcattgcagaaagctttcagcaccgggccctcgccccggctccagctgca
gtagaggctcctgcagagaacatgcagccttcaaccggcatccagtattccctcccacag
ggctaccaggttcctgcgatgcctcaaagcacaagtggacatggacacaacagtaccaca
cctcatattagtccacatgcacacagcctggcagttcagtcgcagagccctgcagttgtc
caaggtcatgtccatccacctgcacctatggcttcagcccaaggacagcagcagcagttt
caacgactaaaggttgaagatgccctctcctatctggatcaagtaaaactgcagtttggg
aatcagccacaagtttataatgatttccttgatattatgaaagagttcaaatcacaaagc
attgacactcctggagttatcaatcgtgtgtcccagctctttaagggtcaccctgacctc
atcatgggttttaacactttcttgccacccggatacaagattgaggttcaaaccaacgat
ctagtcaatgttaccacaccaggtcagattcactacatcaccccccatggtgtttctgta
caaaacatcccgacaagtggggcatccagccaactctcaagccatcaccagcaccagagt
ctgccccagactgcattgcacactaccagtaccccaccacttgctactcagcccgccctg
aacaaaaccagcaagccaattcagtctccggcccatacacccaccagtcagcccaatcca
tccatcccagcatatgcctcaccacgttcaccttcagtgcagccccacactcctgtcagc
agcacgccatccagcggcccacctctccagaacaaccaaccggtggaatttaaccacgct
ataaattatgtcaacaagatcaagaatcgctttcaggggcagccagacatttacaaagcc
tttctggaaatcttgcacacttaccagaaggagcagcgaaatgctaaagaggctggtggt
aattacaccccggcactgactgagcaggaggtctacactcaagtggcaagacttttcaag
aaccaggaggacttgctctcagagtttggacagttcctacctgatgcaaacagctcaatg
cttttgggtaagagtacacccgacagagcagagtccgtccgtaacgaccatggtcctaca
gtgaagaggccctcgctgaacaacaaacagaggctgaatcagaatggcctgccaatcagg
agacctgctggagtgggtgccacaccacctccaaagaagaaatctttagtcatcgcgaaa
acccatggcatgactgaagtcagtaaactcagtacaagcactgaaactatgttctttgag
aaggtgaagaaggctctacggagctctgaggcatatgacaacttcctgcgatgtctgcac
atcttcaaccaggaagtgatttctcgcactgagctggtccagttagttatcccatttctt
ggaaaattcccagagctgtttacgtggtttaagaacttcctgggctaccgagagtccagt
cacggagagtcgagccacgcagagagtttacccaaggagcgctctacagagggtatcgcc
atggagatcgactacgcctcctgcaagaggctgggatccagctacagagcactgccgaag
agctaccagcaacctaagtgcacaggaagaacaccactgtgcagagaggtcttaaatgac
acctgggtttcgtttccatcttggtctgaggattctacgtttgtgagctccaaaaagact
cagtacgaggagcacatttacagatgtgaggatgagcgcttcgagcttgatattgtgttg
gaaaccaaccttgctacgatacgagctctagagacggtgcagaggaggctctctcgcatg
tctgccgaggagcaggtgcgcttcaggctggacaacacaatgggaggctcgtcagaggtc
attcaccgcaaagccattcagaggatatacggagataaggctcccgacatcattgacggg
ctcaagagaaaccccgccgtgtccgtgcccatagttctgaaaaggttaaaaatgaaggag
gaggagtggaaagaagcgcagagaggcttcaacaaaatctggcgggaacagaacgagaag
tattacctgaagtcgctcgaccaccaaggcataaacttcaagcagaacgacaccaaagtg
ttgcgctccaagactctgctcaacgaaatcgagatgctgtatgaagatcgccaggaacaa
gcctcagaggagaatgccactccgccaccaagcggcccacacgtgaccctgacctatgac
gacagccagatcttggaggatgctgccggcctcatcatccatcatgtcaaaagacaagtc
ggcatccagaaggaagacaagttcaagatcaaacagataatccaccatttcattcccgac
ctcctgttcgcgcgacgcggcgagctctccgacttggaggaagaggaggaggaggaggag
gaggacatggagaccaaccaggacagccccaagaagcacaacggcctgccgggccgcagc
ccctcgaagtccaagctgctgttcggcagcacggcagcccagaaactgcggggcactgac
gacgcctacaacttgttcttcgtgaacaactactggtacgtcttctttcgcctccaccac
atcctctgctctcgcctgctgcggatttacggacaggcggagaagcagatcgaggaggat
gcccacgagcgagaatgggaaagagaagtgttggggctgaaaaaggagaagaacgaaaat
ccagcaatccagttaaagatgaaggagccaatggaggtcgacgtcgatgagtactactcc
gtgtttctggaaatggtgcgaaatcttctggacgggaacatggagccggctcagtacgag
gactccctgagggaaatgtttactatccacgcctacattgccttcaccatggacaaactg
attcagagcattgtccggcagctccagcaccttgttaccgacgacatatgtgcgcgtgtg
actgacatgtacctgagcgagagcgccagcaaagccacgggcggcacgacgtccacgcag
acgtgcagggctgctgccgaggggacctaccagcgcaaagcggagcagctcatgtccgac
gagaactgcttcaagctgatgtttctgaagaatcgaggatccgtcagtctggcgttggag
ctgctggatacagaggaggagaactctgacgagccagctgacgcagaaaagtggtcagat
tatgtgagcaggtatttaacctcagactctgcatccccggagctccgcgagcatttggcc
cagaaaccggttttcctccccaggaatttgaggcggataagaaagtgccagagaggatgg
gagcagctgcagcaggagagaattaccaaaggctcctcggacaagtcgcaggacagcagc
agcgagctgaagatgaagtgcatgttcaagctgaactcctacaagatggtctacgtgtgc
aagtccgaggactacatgtaccggcacaccgctctgacgcgggctcatcagtcccaccag
caggtgaacacacgcctccaccgccgctttcaggccttgctggacgactgggccaagacc
cacgtgacgagtgagatgtctgccaacactcagaagtggctgatgggagacggacaggag
ggcctgttgtcgtgcaccaccacctgctgccccgaggtcctccactatctcaacatcaac
aagtaccgggtgaagtacaggacactgtag
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