Kryptolebias marmoratus (mangrove rivulus): 108238551
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Entry
108238551 CDS
T05608
Symbol
hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
108238551 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108238551 (hdac4)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
108238551 (hdac4)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
108238551 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
108238551
NCBI-ProteinID:
XP_017276220
UniProt:
A0A3Q3B7H0
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All DBs
Position
LG6:4354397..4462517
Genome browser
AA seq
1093 aa
AA seq
DB search
MSSHSQHVDVSTAALPSQVPPASTAILPMDLRLVDHPHPHHHQQPPFGLVSHPNSTPAPT
TACPASSEPGSGPVIGHQDQHLQQELVALKHKQQLQRQLLIAEFQRQHEQLSRQHEVQMQ
EHIKHQQDLLALKHQQELLEHHRKMEQQRHEQHLEKQQREQKLQQLKNKERGQESAVAST
EVKMRLQEFVLNKKKALAQRNLNHCLPGDPRFWYGKTQHSSLDQSSPPQTALSAYNHPML
GTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGPITTAKKRSLDVADSA
CNSAPGSGPSSPNNSSSNIPSENGIPISSSPGEVSLLQRLATRDGSMSHLSLYTSPSLPN
ITLGLPATGPASTVVSRHQDGESHLALPALQQGIPLTPAFLPTAHLPSYLASSALDREGP
GGGAAGHNPLLQHMVLLEQSHSPMVGLGGLPLPSPTVSKLVRGHRPLGRTQSAPLPQQPC
GQAQALQQLVVQQQHQQFLEKHKQLFQQQQQHIINKIMSKPSDQVSPVGSGASVSGRQHQ
SHPEETEEELREHQGLSSSSSSSSSSSMPETGLIRGLVIKQEPPDLQEQEERDQRERQAE
QDFLFKQQALLLEQQRIHQLRNYRASMEAAGLPVSISVHRPLTRARSSPDTSSFPIIAQE
PPVKHRFTTGLVHDALMQKHQCICGNATIHPEHAGRIQSIWSRLQETGLRSQCECIRGRK
ASQEELQTVHSEAHVLLYGTNPLRQKLDSSVNPMFVRLPCGGIGVDSDTIWNEIHSSTAA
RLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMGFCYFNSIAIAAKLLQQRLNV
SKILIVDWDVHHGNGTQQAFYTDPSVLYLSLHRYDDGNFFPGSGAPDEVGSDAGEGFNVN
MAFTGGLEPPMADADYLAAFRTVVMPIANEFAPDMVLVSSGFDAVDGHAPPLGGYKLTGK
CFGYLTRQLMGLAGGRLVLALEGGHDLTAICDASEACISALLGNELDPIPYEVLQQRPNA
NAVHSMQRVIEVHGKYWRSLQRSASTLGSSLSEALQRDTEEAETVSAMASLSVANKHIRK
RAEEEPMEEEAPM
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcagcatgtggacgtgagcacagcagcgcttccctctcaggttccc
ccggccagcacagccattcttcccatggacctgcgattagtggaccacccgcacccccac
caccaccagcagcctccatttggcctggtgtcccatcccaactcgacgccggcccccacc
acagcttgccctgcatcgtcagagccaggcagcgggccggtcattggccaccaggatcag
catctgcagcaggagctggtggccctcaaacacaagcagcagctccagaggcagctccta
attgcagagtttcaaagacaacatgagcagctgtcaagacaacatgaagtacaaatgcag
gaacatattaagcaccaacaggacttattggctcttaagcatcagcaggagctgttggag
catcacaggaagatggagcaacagcgtcatgagcagcatctagagaagcagcagcgggaa
cagaaactccagcagctgaaaaacaaggagaggggacaagagagtgcggtggctagtacg
gaggtaaagatgcgactgcaggaatttgtcctgaacaagaagaaagctctggctcagcga
aacctaaaccactgtctgcccggtgatccacgcttctggtatggaaaaacacagcatagc
tctttggatcagagctcacccccacaaacagcactgtcagcgtacaaccacccaatgctg
ggcacatacgactcaaaagacgactttccactacgaaaaacagcatctgaacccaacctg
aagcttcgttcccggttaaagcagaaggtgacggagcgccgaagcagccctctgctccgc
aggaaagatggacccatcactacagccaagaagagatcactggatgtggctgactctgca
tgcaacagcgcaccaggttcaggtcccagttcacccaacaacagctccagtaacatcccc
agtgagaacgggatcccgatctccagcagcccaggagaggtgtctctgcttcagcgactg
gcaacaagagatggttcaatgagccatctatctctttacacctcaccttctctgcccaac
atcaccttaggactaccagccacgggtcctgctagcactgtggtatcgagacaccaagat
ggtgagagtcatctggcactgcctgcgctacagcagggcattccactgacccctgctttt
cttcccactgcccacctgccttcctacttggcctcttcggcactggacagggaggggcct
ggagggggcgcagctggtcacaaccccctccttcagcacatggtactactggagcagagc
cacagtccaatggtgggtctaggtggattaccgctaccatcgcccactgtctccaagctg
gtgcggggccaccgtcccctgggaagaacccagtcggcccccctgcctcagcagccgtgt
gggcaggcccaggccctgcagcagctcgtggttcagcagcagcaccagcagttcctggag
aagcacaaacaactattccagcagcagcagcagcacatcatcaacaagatcatgtccaag
cccagtgatcaggtatctcctgtaggttccggcgcttcagtgtcgggtcgtcagcatcag
agtcaccccgaagagacagaggaggagctcagggagcaccaggggctctcctcatcctcg
tcgtcgtcctcctcttcctcaatgcctgagacggggttgatacggggactggtcatcaag
caggagcctcctgacctccaggagcaagaagagagggatcagagggagaggcaggcagag
caggacttcctgtttaaacagcaggccttgctcctggagcagcagcggatccaccagttg
aggaactaccgagcctccatggaagcagctgggctaccagtcagtatatctgtgcaccgt
cctctgaccagggcccgctcatctccagacacttcttccttccccattatagcccaggag
ccaccagtaaagcaccggtttactacaggtctggtgcatgacgccttgatgcagaagcac
cagtgcatctgcggcaacgccactattcatccagaacacgccggccgtattcagagtatc
tggtccagactgcaggaaacgggcctcaggtctcagtgtgagtgtatccgaggtcggaag
gcgtcacaggaggagttacaaacggtccactctgaggcccacgtcttgctgtatggaacc
aaccctctgagacagaaactcgacagttctgtgaatcccatgtttgtgaggttaccctgc
ggaggcatcggggtggacagcgacaccatttggaacgagatccattcgtccacggcggct
cgtctggccgtcggctccgtggtggagctggttttcaaagtagcatcaggagagctgaag
aatggatttgctgtagttcgaccacctggacaccacgctgaggagagcacacccatgggc
ttctgttattttaactcgatcgccatcgcagccaagctcctccagcagaggcttaatgtc
agcaaaatccttatagtggactgggacgtccatcatgggaatggcactcagcaggccttc
tacacggaccccagcgttctctacctgtctctacatcgctacgacgatggcaacttcttt
ccaggcagtggagcacctgatgaggtgggcagtgatgcaggtgaaggcttcaacgtcaac
atggcttttaccggaggacttgaaccgcccatggctgatgcagactacctcgctgcattc
agaacggtggtcatgcccatcgccaacgagtttgccccagacatggttctggtgtcttct
ggcttcgatgcggtagatggacacgccccacccctgggaggatacaaactgacagggaaa
tgttttgggtacctgaccaggcagctgatgggtctggcgggcggtcgcttggtacttgcc
ttagaggggggtcacgacctcacagccatatgtgatgcctctgaagcctgcatctctgct
ctgcttggcaatgagttggatcccattccgtatgaggtgcttcagcagagaccaaatgcc
aacgctgtgcactctatgcagagagtaatcgaagttcacggtaaatactggcgctcgctg
cagcgatctgcctccacactcggctcttcgttgagtgaagctctgcagcgagacaccgag
gaagctgaaactgtctctgctatggcttcactgtctgtcgctaacaagcacatcagaaag
agggctgaagaggaaccgatggaagaggaagctccaatgtaa
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integrated database retrieval system