Kryptolebias marmoratus (mangrove rivulus): 108238742
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Entry
108238742 CDS
T05608
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108238742 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kmr01007
]
108238742 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108238742 (yars1)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108238742 (yars1)
Enzymes [BR:
kmr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
108238742 (yars1)
Amino acid related enzymes [BR:
kmr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
108238742 (yars1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108238742 (yars1)
Prokaryotic type
108238742 (yars1)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108238742 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
108238742
NCBI-ProteinID:
XP_017276516
UniProt:
A0A3Q3BRM7
LinkDB
All DBs
Position
LG5:complement(16287672..16293514)
Genome browser
AA seq
532 aa
AA seq
DB search
MGEQLSPEDKFNLITRNLQEVLGEEKVKEVLQTRELKVYWGTATTGKPHVAYFVPMSKIA
DFLRAGCEVTVLFADLHAYLDNMKAPWDLLELRVKYYEQVIKAMLESIGVPLEKLRFVKG
TDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTLAEKYLPSLGYAKRSHLMNPMVPGLTGAKMSSSEEESKIDLLDTKED
VKKKLKKAFCEPGNIQNNGVLSFVRYVLFPLRGEFCIKRDPKWGGDKIYSAFEEVEKDFA
AELIHPGDLKASVEASLNELLEPIRKKFQSPELRKLTNTAYPDPSKTKMGGKGAKAGGGG
GGEDDELLPSRLDIRVGKVISVEKHPDADSLYLEKIDVGEAEPRTVVSGLVAYVSQEDLQ
DRTVLLLCNLKPQKMRGIESQAMLLCASVEGEPRRVEPLDPPEGSTPGERVFVEGYESGK
PDDRLNPKKKVWEKLQADLKVSDECVAQWKDKKLMTKLGQITCKTLKGGSIS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgggagagcagctcagtccagaagacaagttcaacctcatcaccaggaacctccaggag
gtcctgggggaggagaaggtgaaggaggttcttcagacgagggagctgaaggtttactgg
gggacggcaaccaccgggaagccccacgtggcttactttgtccccatgtccaagatagca
gatttcctccgagctggctgtgaggtaacagttctgtttgcagacttgcacgcttacctg
gacaacatgaaagctccctgggacctgctggagctccgggtcaagtactacgaacaggtg
atcaaggccatgctggagagcatcggggtgcctctggagaagctgcgtttcgtcaaaggg
acggacttccagctcagccgcgagtacaccctggatgtgtaccgcctgtcctccatggtg
accgagcacgacgcgaagaaggccggagctgaggtggtcaagcaggtggagcatcccctg
ctgagtggtctgctgtacccgggactacaggctctggatgaggagtacctgaaagtggac
gcccagtttggaggagttgaccagaggaagattttcactctggcagagaagtacctgcct
tctcttggttatgcgaagcgatctcatctaatgaacccgatggttcccggactgacgggg
gctaaaatgagctcctcagaagaagagtcaaagatcgatctgctggacaccaaagaggat
gtaaagaagaagctgaagaaggccttctgtgagccaggcaacatccagaacaacggagtc
ctttcttttgtccgatacgtcctcttcccgctgcgaggagagttctgcatcaagcgggat
cccaaatggggaggagacaaaatctattctgccttcgaggaagtggaaaaggacttcgct
gcagagctgatccaccccggagacctgaaggcctcggtggaagcgtcgctaaacgagctg
ctggagccgatcaggaagaagtttcagtcccccgagcttcgcaaactcaccaacaccgcc
tatcccgacccctccaagacaaaaatgggaggaaagggtgctaaggcaggaggaggagga
ggaggagaagacgacgagctgctgccctccagactggacatcagggtgggcaaggtcatc
agcgtggagaaacatccggacgctgactctctgtacctggagaagattgacgtgggagag
gcggagccgaggacggtcgtcagtgggctggtggcctacgtgtcgcaggaagacctgcag
gacagaacggtgctcctcttgtgcaacctcaaaccgcagaagatgcgagggatcgagtcg
caggccatgctgctgtgcgcctcagtagaaggggagcccagaagggtggagccactcgac
ccaccagagggttcgaccccaggggaacgggtctttgtggaagggtacgagtcaggcaag
ccggacgatagactgaacccaaagaagaaggtgtgggagaaactgcaggcagacctgaag
gtctcggacgagtgcgtggctcagtggaaagacaagaagctgatgaccaaactgggacag
atcacgtgcaagacgctgaaaggcggcagcatcagctaa
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