Kryptolebias marmoratus (mangrove rivulus): 108239658
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Entry
108239658 CDS
T05608
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108239658 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108239658 (pbx1a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108239658 (pbx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
YdaS_toxin
HTH_3
LZ3wCH
UCH
Sec15_C
CENP-B_N
Motif
Other DBs
NCBI-GeneID:
108239658
NCBI-ProteinID:
XP_017278005
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Position
LG20:complement(11181577..11234699)
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AA seq
432 aa
AA seq
DB search
MDEQPRLMHSHGGVGMAGHPGLAQHMQDAAAGTDGDGRKQDIGDILQQIMTITDQSLDEA
QARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGVAGPE
KGGGSAAAAAAAAATGGVGADNSAEHSDYRAKLSQIRQIYHTELEKYEQACNEFTTHVMN
LLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFN
KQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEE
ANMYAARTAVNATSVSAHGSQANSPSTPNSAGSAGSFNMSNSGDLFMSVQSLNGDSYQGG
QVGANIQSQVDTLRHVISQTGGYSDSLAASQMYSPQGINVRPTNGGWQDAPTPSSVTSPT
EGPGSVHSDTSN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagccccggttgatgcactcccacggcggggtgggcatggccggacacccc
ggcctggcgcagcacatgcaggacgccgcggcgggcacggacggggacggccggaagcag
gacatcggagacattttacagcaaataatgaccatcacggaccaaagcttagacgaagcc
caggcgaggaaacacgcactcaactgccaccgaatgaaacctgccctcttcaacgtcttg
tgtgaaataaaagagaaaacagtgctcagtatccgtggtgcccaggaggaggagcctcca
gatccgcagctgatgcgactggacaacatgcttctagcggagggcgtggccgggccggag
aagggcggcgggtcggcagctgcggcagccgctgcggcggccaccgggggcgtgggcgcc
gacaactccgcagaacactcggactacagggccaagttgtctcagatccgacagatctac
cacacggagctggagaagtacgaacaggcgtgcaatgagttcaccacccatgtgatgaac
ctgctgagggagcagtctcgaacacgacccatttcgcccaaagagattgagcgcatggtc
ggcatcatccaccgcaagttcagctccatccagatgcagctcaagcagagcacctgtgag
gccgtcatgatcctgcgctcgcgctttctcgatgctagacggaagagaaggaacttcaac
aaacaggcgacagagatcctgaatgagtatttttactcccacctcagtaacccttatcca
agtgaggaggccaaagaagagctggccaagaagtgtggcatcactgtgtcgcaggtatca
aactggtttgggaataagagaatcagatacaagaaaaacatcggcaagttccaagaagag
gccaacatgtacgcagccaggactgcggtcaacgccaccagcgtgtcggctcacggcagc
caggccaattccccgtcaactcccaattcagcaggttctgctggctcttttaacatgtca
aactccggagacttgttcatgagtgtgcagtccctcaatggggactcgtaccaagggggg
caggttggggccaacatacaatcccaggtggatacccttcgccatgttatcagccagacc
ggaggatacagtgacagcctcgcagccagccagatgtacagtccacagggcatcaacgta
agacctacaaacggaggctggcaagatgctccgactccttcgtcagtgacatcgcccaca
gaaggacctggaagtgttcattcagatacttccaactga
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