Kryptolebias marmoratus (mangrove rivulus): 108240270
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Entry
108240270 CDS
T05608
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108240270 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108240270 (chrna5)
Ion channels [BR:
kmr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108240270 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Cadherin_5
Motif
Other DBs
NCBI-GeneID:
108240270
NCBI-ProteinID:
XP_017279120
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Position
LG15:complement(14816451..14826326)
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AA seq
475 aa
AA seq
DB search
MLGAGGAPTSLRLLLLIPLLCRCHLCHSLRIPKLSSYAKAEDKLFKYLFENYQKWVRPVE
YLNQTINVKFGLAISQLVDVDEKNQLMTTNVWMKQEWTDMKLRWSPEDFLGITTIRVPSD
RIWLPDVVLYDNSDGRFEGTVTKAVVKHDGTITWTPPANYKSACTIDVTFFPFDLQNCSM
KFGSWTYEGSQVDIILEDFHVDKQDYFDNGEWEIVKATGSRGLRTDGSTFYPTITYFFII
RRLPLFYTLFLIIPCIGLSFLTILVFYLPSNGGEKISLCTSVLVSLTVFLLVIEEIIPSS
SKAIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHTNMAPWVRRIFLHRLPKLLCM
RSHVDRYATSGAAGAGRTEGPGRMQEPGPEFKPLLYNQHNLQAALESIRYITMHVVKENQ
VREVVQDWKFVAQVLDRMFLWAFLLVSILGSALLFIPVIYKWASIIVPINPGSTL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcttggagcaggaggagcgcccacctctctcagactgctgctgctgattccattgctg
tgccggtgccacctgtgccactcgctgcggattccaaaactctcttcgtatgcaaaagca
gaggacaaactgttcaagtatctctttgaaaactatcagaaatgggttcgtcctgtggag
tacctgaaccagaccatcaatgtgaagttcggcctggctatctctcagcttgttgatgtg
gatgagaaaaaccagttgatgacaactaatgtttggatgaaacaggagtggaccgacatg
aaactcagatggagtcctgaagactttctgggcatcacaacaatccgtgttccttctgac
agaatctggctccctgatgttgttctgtatgataactcagatgggcgttttgaagggact
gtcaccaaggctgtcgttaagcatgatggcaccataacatggactccaccagccaactac
aagtcagcctgcaccatcgatgtcaccttcttcccctttgacctccagaactgttcaatg
aagttcggatcttggacctacgaaggttcccaggtggacataatcctggaggacttccac
gtggacaagcaggactattttgacaatggtgaatgggagatagtgaaggccacaggcagc
cgtggtttgaggaccgatggcagcactttctatcccaccatcacctacttctttattatt
cgcaggttgcctcttttctacaccctcttcctcatcattccctgcatcggcctgtccttc
ctcaccattcttgtcttctatctaccctcaaacggtggtgagaaaatctctctctgcacc
tcagtgctagtgtcgctcaccgtattcctcttggtcattgaagagatcatcccatcctct
tcgaaggcgatccctctcatcggagagtacctggtttttaccatgatctttgtcacgctc
tccattgtcatcaccgtgtttgcgatcaacatccaccaccgctcttcctctacacacact
aacatggcaccgtgggtgagacggattttcctgcatcggctgcctaagctgctgtgcatg
cgcagccatgtggaccgttacgcgacgagtggagcggccggagcaggaagaaccgaagga
ccggggaggatgcaggagccaggacctgagttcaaaccgctgctttacaaccaacacaac
cttcaagcagctttggagtctattcgctacataaccatgcatgtggttaaagaaaatcaa
gtccgagaggtggtgcaggactggaagtttgttgcccaggtcctggatcgaatgtttttg
tgggctttccttctggtgtccattcttggctctgctttacttttcattccagttatttac
aaatgggccagcatcattgttcctatcaatcctggaagtactctctaa
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