Kryptolebias marmoratus (mangrove rivulus): 108242661
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Entry
108242661 CDS
T05608
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03320
PPAR signaling pathway
kmr04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108242661 (rxrba)
03320 PPAR signaling pathway
108242661 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108242661 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
kmr03310
]
108242661 (rxrba)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108242661 (rxrba)
Nuclear receptors [BR:
kmr03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
108242661 (rxrba)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
108242661
NCBI-ProteinID:
XP_017283122
UniProt:
A0A3Q3BH77
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Position
LG5:complement(2636077..2654853)
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AA seq
469 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGQRSPPLVPSAASMTSLPPITTAGVNSPISSIGSPFSVIS
SSLDSPCLPGTPSVGYGPISSPQINSTVTMSGLHAVSSSDDVKPPLGLKQLSAHSPGPML
SQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIVDKRQRNRCQY
CRYQKCLAMGMKREVAKMNDRSVQEERQRNKEREGEVESTSAVNEEMPVEKILEAEMAVE
QKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRANNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLEAYCKQKYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagattctcgcagtccagacagctcgtctgtgtcctccccaccttcg
ggccaacgatcacccccactggtcccctcagcagcttccatgacctccctgccacccatc
accacagctggagtcaacagccctatcagtagcatcggttccccattttccgttattagc
tcatcactggactcaccctgcctacctggcactccatcagtgggatatggcccgattagc
agccctcagatcaactcaacagtgaccatgtccgggctccatgcagtgagcagctcagat
gatgtgaaacctcctctgggcttgaagcagctgtcagcccacagcccaggtccgatgctt
tcccagaaacgcctttgttccatctgcggagatagatcctctggtaaacattatggtgtc
tacagctgtgagggatgtaaaggcttcttcaagagaacagtgcgaaaggacctaacctac
acctgtcgagacaataaagactgtatagtggataagagacagaggaaccgctgccagtac
tgccgctatcagaagtgcctggccatgggcatgaagagagaagtggccaagatgaacgac
agatctgtccaggaggagcgtcagaggaacaaggagcgagaaggagaggtcgagtccacc
agtgcagtgaacgaggagatgccagtggagaagattttggaagctgagatggctgtagag
caaaagacggagctccatgcagatggaagctcaggcggcagctctcccaacgatccagtc
accaacatctgtcaggcagcagataagcagctcttcaccctggtggagtgggccaagagg
atccctcacttctctgagctgcccctggatgatcaggtcatcctgctgcgtgcaggttgg
aatgagctcctgattgcatcattctcccatcgctccatctcggtgaaggatgggatttta
ctggccacaggtctccatgtccacagaaacagcgcccacagtgcaggggttggagctatc
tttgacagggcgaacaatgctgaggttggggccatatttgacagggttttgaccgagctt
gtaagcaaaatgagagacatgcaaatggacaaaacggagctgggctgccttcgtgcaatt
attctttttaacccagatgccaagggtttgtccaaccccagtgaggtggagcttctgaga
gagagggtctatgcatctcttgaggcttactgcaaacagaaataccccgatcagcagggc
aggtttgcaaagctcctccttcgactcccagcactgcgctccatcggtctaaagtgcctg
gagcatttgttcttctttaaactgattggtgacacacctattgacacctttctgatggag
atgcttgaggcgcctcaccagctgacctaa
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