Kryptolebias marmoratus (mangrove rivulus): 108244632
Help
Entry
108244632 CDS
T05608
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 17
KO
K20689
Rho guanine nucleotide exchange factor 17
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108244632
Membrane trafficking [BR:
kmr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108244632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
RhoGEF
PH_19
BBS2_Mid
Motif
Other DBs
NCBI-GeneID:
108244632
NCBI-ProteinID:
XP_024865066
LinkDB
All DBs
Position
LG2:complement(15650907..15710162)
Genome browser
AA seq
2677 aa
AA seq
DB search
MAASEGHNAGVYRSVSFKNLGSSGSGRRRGAARGAGAPPESRRSPAERNRPRHVAGASRK
VSKISAASLPTADLSTRGSSAFPSSVAPSIQQLTERFSSSSSSSSSGGCSTLPRAPGSGR
TRASPARKSPREEDGGGAGCPASGAESLCDARRLHSGTDSVSGSDSERRSDGPGVVARLS
TDSSGGGKRDSPRTGARAAELRKSFTTDEEEDVRGAPPPRKAHKSSFRTHHGDFIPSHSD
RWPSVTKIRQLFDEKGGNALQPPRTNTYEDLKAADRRDLQELRCSESSPLFDRSGSSANK
ASDPALPGNTGSHKARETSRCLTDFHSKSDHRQGSEDEGVNAETNRAPARSGSGCHAGRY
RLNSSPHRSLSASTESEAARRTPRATATASTSDPKPDLQHCATSSWSGSAGSSCSSSQQQ
LTERERRDRQGVGLPGDSLHSSHSSSKTPAPTTSSVSSAPAPDKAITSCPSTVAPSSEPT
TVRSSLGSRWKVNSADEEEVHARRRRGYPSDPKPPVTCRGGGERTATERGGSYLSRSKNG
WWGAKVIGRSSGSEEDSPTSLGPHCREAVRRRSLRKKKKVSGAAAAAAAGRDDYNDRDGE
SEDSDSDTALTMDHLERQQNTGEFPGAIHRSHSAREHGSHSYRAKVQHWERITSPVMPST
LPSVSRVAKVNIPPFVSSPGGSRCSSRYSSTETLKEEDQGSCAGLPASVLLNRSEAEGGA
GRTASSSVLSKTYHGNFTMYRSPSFGHGDNFSRSPIRVRPKLVPTVTPTLNVPSGEGGRS
SQFRGAETVALKKTTQGANVDDNKKLISTSNPDITSETMSLLSFLKSGLPELKVRRTNEG
DRTGGVGGSSVCRRSSGPHGGPALPLGRHPSLKDLTATLRRTKSFTYSDKPTASARCYLT
GAAAKRSSSEQQLDLDEDKAEVRVVLSDREVESDSGDFRVGRGQTIKNYRLDDEDNGDEV
MPTPFQERCVQEARQVIQDICQMCTREDDDDYASVNTTEDKLGGKCLQVKKTREEKGDAG
GVKDETRGALQAESENAKDKDKHEQERENSGRQRSGQSMQLEKLSSRGTECWEKPKRQGR
ELEGALQKGDSEESMLYDRSVDELSGHESSLTDEGIVTEPETGPSDLSERSFLCSAGVNL
GSRLGRDAVVQPVSGWKQPAHEAESFKQEVTATENSSSCTSRLSKASLPCSMALPACMAQ
TDNLIMEVSAAACVNIVNTGSEGILINSAVFQGSAAAAAGGGGCGVFEAPATPSGSRRRR
KFSPSGNNNTSSDSSNGSHADSTITAVGNGESTVYRSLSDPMPQRRCSVVEEGNNFSSVD
SNLLGSLSVKGGGGGDPEASSTSSVSEYKGSVASDLSVYSDGGLRCDSIQDYSGVIRNVV
AEPGAMNRLVTDDHGNGKAPKKKSFSDPSRRSDAPILSQIDSQFKGQTGSSQPISELDQS
GQIPPSSSEPILSEQREELWEPESKTAQILVKISDCSLQSNNPEDEDDVIGGEEEVQRFN
FDLRLAEVFSPRKMRRPTRKRPNRLAFFSDEDQFEPLELDSEVQEAPSNRSRLTSSPPAS
LLNLKSRPKHVRHASEPATFTPISPAPQLQPLKEVDSFAVQSTEEPPALSKPPGNEARSF
EDASKNCNLGAHEQVAEVRPVRGTSDGAQGLPTTSEGPGVTSSCGLTESGPQKVGPEDSP
PVPTLQRTKPKVDMRKHVMMTLLDMEQSYVESLRTLIQGYMRPLKQPDGGAIVDPQLVDE
MFYQIPEILEHHEQFLEEVAGCVGQWHDRQTVGHILIQSFSKEALANMYSAYIDNFLIAK
DAVRIAKEAKPAFHKFLEQNMRENKEKQALGDLMIKPVQRIPRYELLVKDLLKHTSEDHP
DHVLLLDAQRDIKRLAERINKGRRSAEEAEREARVIQEIETHIEGVEHILNPQRKFLRQE
IVMEAKTVGGKKDRSLFLFSDLIICTTLKRKSGSLRRSSMSLYSAASVIDTSSKYKFLWK
LPLEDVEVVKSSTQATNKESIQKAISRLDEDLSTLGQISKLSETLSFPHQSLDEVIKDLM
ASVHKELSEKQSLAFSMTFLPTKLEFTTASAESSFVFEFSSPDARSGFEQAFEEAKKKLA
MNKDQWDPEFLKAIPIMKTRSGMQFSCASPSHSCPDSGCEVWVCNSDGYVGQVCLLNIKD
EPTVEACIAVCSARIICIAAVPGLKGRDRGSELVPASGAPGHAQQQQQLHISISHSSLEL
TVQPTGPGTELVPFDSDDTDDEDSPSPSSTLQSQASHSTISSSYGNDEGPSSKDMATETT
SSEEEQEFPAASSYGTPGAPGVGGGGGRAQAESPMDGRAMRRSSRGSFTRASLEDLLSID
PEAYQSSVWLGTEDGCIHVYQSSDNIRNRKNSMKMQHSASILCILYLDNKVFVSLANGEV
IVYQREAGSFWDPQSSQTLVLGTPSSPITKMVPVGGKLWCGSLNRVLVINTTTLVQEHWF
QVGTDSSRCVTCMVAYGQGVWLALQGSAQVRLYHAQSWESLTEVDVAPAVHKMLAGADAI
IRQHKAACLRITALLACKDLLWIGTSAGVVLTLTIPAVSSGTGAGTLKCPLVPMGSAHGH
TGHVRFLTSIELPEGFDINFPPTTTDSTGNPSQSGGPIDGSPQRRDSAHRRASAHIPAKT
NHLVISGGDGYEDFRLTNSSETVGRDDSTNHLLLWRV
NT seq
8034 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgagcgaggggcacaatgcgggtgtgtaccgcagcgtctctttcaaaaatctg
ggctcctccggcagcggcaggcggaggggagcggctcggggggctggggccccgccggag
tcccgccggagcccagcggagcggaaccgtccccgacacgtggccggcgcgtcgagaaaa
gtttccaagatctccgccgccagcctcccgaccgcagacttgtcgacgagaggctcctcc
gccttcccctcctccgtcgctccatccatccagcagcttactgagaggttcagcagcagc
agcagcagcagcagcagcggtggctgtagcaccctcccgcgggctccaggctccggcagg
acgcgcgcctctccggctcgtaaatctccccgggaggaggacggcggcggggcagggtgt
cccgcgagcggagcggagtccctctgcgacgccaggaggcttcactccggcaccgactct
gtgtcgggctcggactcggagaggagaagcgacgggccgggtgtcgtcgcgcgtttgtcc
accgacagcagcggcggcggcaagagagattccccccggacaggcgcgcgagccgccgag
ctcaggaaaagtttcactacagacgaggaagaggacgtcaggggcgcccccccgcctcgc
aaagcccacaaaagttccttccgtacccaccacggcgactttatcccctcgcattctgac
aggtggcccagtgttaccaaaataaggcaactttttgacgagaaaggcggcaacgctttg
cagccgcccaggactaacacatatgaggatttaaaagcagccgacagaagggacttgcag
gagctacggtgcagtgagagttcccctctctttgacagaagtggcagctctgctaacaaa
gccagtgacccggctttgcctgggaacacaggaagccacaaggccagagagacttctcgc
tgccttacggactttcattccaaatctgatcatcgtcagggctcagaggatgagggagtg
aacgcagagacaaacagagcgcctgccaggagcggtagcggttgtcacgctggtcgctac
aggcttaactcgtccccgcacaggtccctaagtgccagcaccgagtccgaggccgcgcgt
aggacccccagggcgacggcgacggcatcgacatctgaccctaaacctgaccttcagcac
tgcgctacgtcgtcttggagcggatctgcgggctcctcctgctcctcctctcagcagcaa
ctgacagagagggagagaagggatagacagggggtcgggctgcccggggatagtttacat
tcctcacatagctcctctaaaacaccagcccccaccacctcctccgtctcctctgctcca
gctccagataaagccattacctcctgcccctctactgtagctccttcctctgagccaaca
acggttcgttcctctctcggctcccgctggaaggtgaactccgcagacgaagaggaggtg
cacgccaggaggcgaaggggttacccctctgaccccaagcctcccgtcacctgcagagga
ggaggggagaggactgccacggagcgcggcggcagctatttatctcgcagtaaaaatggc
tggtggggggctaaggtcattggcaggtcctcgggcagcgaggaggacagccccacatct
ttaggcccccactgtcgagaggcagtgcgccgccgctctctgagaaagaagaagaaggtc
agcggggctgccgctgcggccgcagcaggccgcgacgattacaatgatcgtgacggcgaa
tcagaagacagtgacagcgacacggccttgaccatggatcacttagagaggcagcagaac
accggggagtttccaggggcgattcacaggagccactcggcacgagagcacggcagtcac
agttacagagccaaggtgcagcactgggagcgcatcacctcgcccgtgatgcccagcacg
cttcccagcgtgtcacgggtggcgaaagtgaacatccctccttttgtttccagccctggc
gggtcacgctgcagcagccgatattccagcaccgagacgttgaaagaggaggaccaggga
agctgcgccggtcttccagccagcgtgctccttaataggagtgaagcagaaggtggcgca
ggcagaactgcgtcctcgtctgtgctgagcaaaacctaccacgggaattttaccatgtac
cgctccccaagctttggccacggcgataacttctcccgttcccctattcgcgtgcggcca
aagttagtgccaacagtaacccccaccttgaatgtaccttctggagaaggtgggaggtct
tcacagtttagaggggctgagaccgttgcattaaagaaaacaactcagggggccaatgta
gatgataataaaaagctgatttccacgtccaaccctgatatcacgtcagaaactatgtcc
ctcttaagctttctgaaatctggcctaccagagctgaaggtgcggaggacaaacgaaggg
gacagaactggtggtgtggggggatcgtcggtgtgcaggaggagctcaggccctcacgga
ggacctgctctgcctttgggccgccacccttcgttgaaagatctaactgcgacacttaga
cgcacaaaatccttcacttattctgacaaacccacagcaagtgcaaggtgctacttgaca
ggtgccgccgctaaaaggagctcctctgagcagcagcttgacttggatgaagacaaagct
gaggtgagggtggtgttgtcagacagggaagtagaaagtgacagtggggattttagagtc
gggcgaggacaaacaattaagaattatagactggatgatgaggacaatggggatgaagtc
atgcccactccgtttcaagaaaggtgtgtgcaggaagccaggcaggtcattcaagatatc
tgccagatgtgcacgagagaagatgatgatgattatgcaagtgtaaatacaactgaggat
aaattagggggtaaatgtttacaagtcaagaaaacacgtgaagagaagggagacgcagga
ggcgttaaagatgagacgagaggggctctacaggccgagtctgagaacgccaaagacaaa
gataaacatgagcaggagagagagaacagtgggaggcagaggagtggacaaagtatgcag
ctggagaagttaagcagcaggggtacagagtgctgggagaagccgaagagacagggcaga
gagctggagggagccctgcagaagggcgactcggaggaaagcatgctctatgaccgctcc
gtggatgaactttcaggccacgagtcgagcttaacagacgaggggattgtaacggagccc
gagacaggtcccagtgacctctcggagaggtcgttcctgtgctcagcaggggttaattta
gggtcaagattaggcagggatgcggttgtgcagccggtctctggatggaagcagccggct
catgaggcggaaagcttcaagcaggaggtaacggcgacagagaatagctcgagttgcacg
agccgtctgagtaaagcgagtttgccttgctcgatggctctccctgcatgcatggctcag
actgacaaccttattatggaggtgagcgctgctgcttgtgtaaacattgtcaacactggg
agtgaagggatcctcattaacagtgctgtgtttcaggggtcagcagcagcagcagcagga
ggaggagggtgtggggtatttgaagcccccgcaaccccgagcggtagccgtcggaggcgc
aagttctccccatctggtaacaacaacacaagctctgattccagcaacggcagtcatgct
gattcaacaataacagctgtaggaaacggggagtcaacagtctaccgttctctcagcgac
cccatgcctcagcggcgctgttctgttgtggaagaagggaacaacttttcttcagtagac
agcaaccttctgggttccctgtctgtcaaaggaggagggggaggggatccagaggcctct
tctacgtcttcagtgtccgaatacaagggcagtgtagcaagcgacttatctgtgtacagt
gatgggggcctcagatgtgacagcatccaagactacagtggggtgatcaggaacgttgta
gctgagccaggtgcaatgaacagactggtcacagatgaccacggcaacggcaaagccccc
aagaaaaagtctttcagtgaccccagtcgtcgcagcgatgctcctatactgtcccagatt
gactctcagtttaaaggccaaaccggcagcagtcagccgatcagtgagctggatcaatct
ggacagattcctccttccagcagtgagccaatcctgagtgaacagagggaggaattgtgg
gaaccagagtctaaaactgcacagatactggtcaagatttcagattgtagtcttcagtct
aataatccagaagatgaagatgacgtaataggtggagaggaggaagtgcagaggttcaac
tttgaccttaggctggccgaggtcttttctcctcggaagatgcgtcgaccgactagaaag
cgtcccaacaggttggcgtttttctctgacgaggaccagttcgaacccctcgagttggat
tctgaggtgcaggaggcgcccagcaaccgaagtcggctcacatcttctcctccagcttcg
ttgctgaatttaaaatccagacccaagcatgtccgccatgccagcgagcctgccaccttc
accccaatctccccagctccgcaactccagccgctgaaggaagtggactccttcgcagtc
cagtccaccgaagaaccgccagctttaagcaagcccccaggaaatgaagcccggtctttc
gaggacgcgtcaaagaactgtaatcttggcgcccacgaacaggtcgctgaggtcaggcct
gttcggggcacgagcgacggagcccagggtttaccgactacttcagagggcccaggtgta
accagcagctgtgggcttaccgagtctggacctcagaaagtaggcccagaggactctcca
cctgttccaacgctgcagaggaccaaaccaaaagtggacatgagaaagcatgtgatgatg
actctgctggacatggagcagtcgtacgtggagtcgctgcgcaccctaatccagggttac
atgcgtcccctgaagcagccggacggtggcgccatcgtggacccccagctggtggacgag
atgttctaccagatcccggagatcctggagcaccacgagcagttcctggaggaggtggcc
ggctgcgtaggccagtggcacgacaggcagactgtgggacacatcctcatccagtcgttc
tccaaggaggccctcgccaacatgtactcggcgtacatcgacaacttcctgattgccaaa
gatgccgtgaggatcgccaaggaggccaagccggcgttccacaagttcctggagcaaaac
atgcgcgagaacaaggagaagcaggctctgggcgacctgatgatcaaaccggtgcagagg
attcctcgctacgagctgctggttaaggacctgctgaagcacacctcggaggatcacccg
gaccacgtcttgctgctggacgcccagagggacatcaagcgcctggcggagaggatcaac
aagggccggcgctcggccgaggaggccgagcgggaggccagggttatccaggagatcgag
acgcacatcgagggagtggaacatattctgaatccacagaggaagttcttgagacaggag
atagtcatggaggcgaagacggtgggcgggaagaaggaccgctcgctcttcctcttcagc
gatctgatcatctgcaccaccctgaagaggaagtccggctcattaagacgcagctccatg
agcctatactccgccgccagcgtgatcgacacgtccagcaaatacaagtttctgtggaag
cttcctctggaggacgtggaggtggtgaaaagctccactcaggcgacgaacaaagagagc
atccagaaggcaatcagtcggctggatgaagacctcagcaccctgggtcagatcagcaaa
ctgtcggagaccctcagcttcccgcatcagtccctagacgaggtcataaaggacctgatg
gcgtccgtgcacaaggagctgtcggagaagcagtccctggccttcagcatgaccttcctg
cccacgaagctggagttcaccacggcctccgccgagagcagcttcgtcttcgagttcagc
tccccggacgctcgttccggcttcgagcaggccttcgaggaagccaagaagaagctcgcc
atgaacaaggaccagtgggacccagagttcctgaaggccatccctataatgaagacccgc
agtgggatgcagttctcgtgcgcctctcccagccacagctgtcccgacagcggctgcgag
gtgtgggtgtgcaacagcgacggatacgtggggcaggtttgcctgttgaacatcaaggac
gagcccacggtggaggcctgcatcgccgtgtgctcggcgaggatcatctgtatcgccgcg
gtgccaggactcaagggaagggatcgtggatcagaactggtcccggcctctggagcaccg
ggccacgcccagcagcagcagcagctccacatatccatctcccattccagcctggagctg
acggtgcagcccacaggtccggggacggagctggtgccattcgacagcgacgacacggac
gacgaagactcgccgagtccctcgtccactctgcagagtcaggccagtcactccaccata
tcgtccagctacggcaacgacgagggtccgagctccaaagacatggccaccgagaccacc
agcagcgaggaggagcaggagttccccgcggccagctcctacggcaccccgggggcgccg
ggagtgggaggagggggtggccgggctcaggccgagagcccgatggacggccgtgccatg
cggcgatcgtcgcgggggtccttcacccgggcgagcctggaggacctgctcagcatcgac
ccggaggcctatcagagctccgtgtggctgggcaccgaggacggatgcatccacgtgtac
cagtcctcggacaacatccgcaaccggaagaacagcatgaagatgcagcactcggcctcc
atcctctgcatcctgtatttggataacaaagtgtttgtgtcgttagcaaatggagaggtg
attgtttatcagagagaagcaggtagtttctgggacccccagtcctctcagacactggtt
ctcggcacacccagtagtcccatcaccaaaatggtcccggtcggcgggaaactgtggtgc
ggctcgctaaacagggtcctcgtcatcaacacgaccacgctggtccaagagcactggttc
caggtgggcaccgacagcagccgctgcgtcacctgcatggtggcgtacggccagggggtg
tggctggcgctgcagggcagcgcgcaggtcagactgtaccacgcccagagctgggagagc
ctgaccgaggtggacgtggcgcctgccgtgcacaaaatgcttgccggtgcagatgcaatc
atcagacagcataaagccgcctgcctcagaatcacagccttactggcctgtaaggacctt
ttgtggatcggtaccagtgcgggggtggtcctcactctaaccatcccagccgtgagctca
ggaaccggcgccgggacgctgaaatgtcctctggtgccgatggggtcggcccatggtcac
acgggacacgtccggttcctgacgtccatcgagctcccagaagggttcgacataaacttc
cctccgacaacaactgactccacaggtaatccgtcgcagagcggcggcccgatcgacggg
agcccgcagcggcgggattccgcgcaccgccgggcctccgcccacatccccgcgaagacc
aaccacctcgtcatatccggcggcgacggctacgaggacttcagactgaccaacagcagc
gagacggtcgggcgggacgacagcaccaaccacctgttgctttggagggtctga
DBGET
integrated database retrieval system
