Kryptolebias marmoratus (mangrove rivulus): 108247228
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Entry
108247228 CDS
T05608
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04120
Ubiquitin mediated proteolysis
kmr04137
Mitophagy - animal
kmr04144
Endocytosis
kmr04340
Hedgehog signaling pathway
kmr04350
TGF-beta signaling pathway
kmr04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108247228
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108247228
04350 TGF-beta signaling pathway
108247228
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108247228
04137 Mitophagy - animal
108247228
09144 Cellular community - eukaryotes
04520 Adherens junction
108247228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108247228
04121 Ubiquitin system [BR:
kmr04121
]
108247228
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108247228
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108247228
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108247228
Autophagy
Mitophagy
Other mitophagy associated proteins
108247228
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
HECT type E3
108247228
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108247228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
108247228
NCBI-ProteinID:
XP_017290680
UniProt:
A0A3Q3B018
LinkDB
All DBs
Position
LG3:complement(20201852..20244355)
Genome browser
AA seq
775 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGIGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAVACVPPGEQRAQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRVAMDIQNTNLS
HPPQLKDQGGPGGPQQALSPAQLPEEAECLTVPKYKRDLVQKLKVLRQELSQQQPQAGHC
RIEVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKPITLEDMESVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIPHELKPNGKSIPV
TEETKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKID
ISDWKSNTRLKHCTPDSNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYEKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccaaggagttaggaggaatggcccagtgaaactgcggttgacagtcctgtgt
gcaaagaacttggcaaagaaagacttctttcggttgccggatccttttgctaaagtggtg
gtggacggttctggacagtgccactcgacagatactgtgagaaatactcttgacccaaag
tggaaccaacattatgatctttatattggaaagacagactccattactatcagtgtatgg
aaccacaagaagatccacaaaaagcagggtgcaggtttcctcggctgtgtccgcctcctg
tccaacgccatcaacagacttaaagacacaggctatcagagattggatctgaataagctg
ggccccaatgacaacgatactgtgagaggacagatagttgtgagtctacagtccagagat
cgcatcgggatcggaggcccggttgtagactgcagtcgtctgtttgacaacgacttgccc
gacggctgggaagagaggaggacagcctctggaaggatacagtacctgaaccacatcacg
cgcaccacacagtgggagagacctaccaggccagcatcagagtactccagcccgtcgggg
cgtccactgagctgtgtggtggacgagaacacgcccgtgatgactcccgttaacggggcc
gtggcctgcgttcctccgggcgaacaacgggcccaggagagacgggttcgatctcagcgg
catcggaattacatgagtcgaacacacttgcataccccgcccgacctgccagagggttac
gagcaaagaacaacccagcagggccaagtgtattttcttcacactcagactggagtcagt
acttggcatgacccccgggtacccagggacctaagtaatgtaaactgtgaggagcttggc
ccactgccacccggctgggagatcaggaacactgccaccggccgcgtctacttcgtcgac
cacaacaatcgaacgacacagttcacagacccccggctgtctgccaacctacatctagtc
ctcaacccaagtccaaatggttcccgtgtggccatggacatccaaaacactaacctcagt
cacccgccgcagctcaaggaccagggtggtcctgggggtccgcagcaggctctgtccccg
gcccagttacccgaagaggcagagtgcctgacggtgcccaagtacaagagagacctggtg
caaaagctgaaggtgctgaggcaggagctttcccagcaacaaccccaggctggtcactgt
cgcatcgaggtcagccgggaggagatctttgaggagtcttaccgacaagtgatgaagatg
cgccccaaagatctttggaaaagactgatgatcaaattcagaggagaggagggactggac
tatggaggcgtagccagggaatggttatacctgctgtcacacgagatgctgaacccgtat
tacggcttgttccaatactccagagacgacatctacacccttcagatcaacccagactct
gcggtcaacccagagcatctgtcgtacttccactttgtgggtcgtatcatgggcatggcg
gtgtttcacggccattacatcgacggaggcttcacgctgcccttctacaagcagctgctt
ggaaaaccaatcacgctggaagacatggagtccgtcgacccagacctccacaacagcctt
gtttggattctggagaatgacatcaccggagtcctggatcacaccttctgtgtggagcac
aacgcctacggagaaataatcccacacgaactcaagcccaacgggaagagcatccccgtg
acagaggagaccaagaaggagtatgtcaggttgtatgtgaactggcgcttccttcatggc
atcgaggctcagttcctggccctgcagaaaggattcaacgaggtcatcccacagcacctg
ctcaaagccttcgatgagaaggagttggagctgatagtgtgcggtctggggaagatcgac
atctctgactggaagtccaacacccgtctgaagcactgcacgcctgacagcaacattgtg
aaatggttctggaaagctgtggagtccttcgatgaggagcggagggcgcggctgctgcag
tttgttactggctcatcgagagtcccgctgcaaggctttaaggctttacagggtgctgca
ggacccagactcttcaccattcatcagatagacgccaacgcgaataacctgcccaaagcc
cacacctgtttcaaccggatcgacatccccccctacgagagctacgaaaaactatacgac
aagctactgacggcgatcgaggagacgtgtggcttcgcggtggaatga
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