Kryptolebias marmoratus (mangrove rivulus): 108248095
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Entry
108248095 CDS
T05608
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04020
Calcium signaling pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108248095 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108248095 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108248095 (grin1b)
Ion channels [BR:
kmr04040
]
Ligand-gated channels
Glutamate (ionotropic)
108248095 (grin1b)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
108248095
NCBI-ProteinID:
XP_017292090
UniProt:
A0A3Q3ABS8
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Position
LG1:30761644..30815460
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AA seq
939 aa
AA seq
DB search
MEERSVLLLAVLHCCSLALCGCEPRLVNVGAVLSQKRYEQGFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKRL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSQDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMNGKALSEAPDGLLGLQLINGKNESAH
ITDAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNYQQKSSRLVQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTK
LKIVTIHQEPFVYVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFC
IDLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPKTSFR
SITSTSDLKRRMAPGDATPYPTDITGQLNLSDPSVSTVV
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgcagcgtcctgctgctcgccgtgctgcactgctgctcgctggcactgtgc
ggctgcgagccccgcctggtcaacgtgggcgccgtcctgagtcagaaacgctacgagcag
gggttcaaggaggcggtgagtcaggccaacgccctctacggcaaggacaagttcaagatg
aacgccatctccgtcacgcacaagcccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtgtacgccatcctggtcagccatcctccgcagtccaacgac
cacctgactccaacacccgtctcctacaccgccggcttctaccggattcctgtggtcggc
ctgacgacgcgcatgtccatctactccgacaagagcatccacctgtccttcctgaggacc
gtccccccgtactcccaccaggcccaggtgtggttcgacctgatgagggagttcaggtgg
aaccacatcatcctgatcgtcagcgacgaccacgagggccgcgccgcccagaagaggctg
gagacgctgctggaggagcgcgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaacacctaaggcggagaaggtgctgctcttcagccag
gacaccaacctgacggcgctgctgctggaggccaaagacctggaggcccgagtcatcatc
ctgtcagccagtgaggacgaagcagcagccgtgtacaaagcggcccggcagctgaacatg
accggttctggttacgtgtggctggtcggggagagggagatgaacggcaaagctctgagc
gaagctccggatggcttgctgggcctccagctgattaacggtaagaacgagtcggctcac
atcacggacgccgtcgccgtggtggctcagtccctgcaggagctgtttgagaaggagaac
atcacggagcctccgcggggctgcgtggggaacaccaacatctggagaaccgggccgctc
ttcaaacgggtgctgatgtcatcaaagtaccctgacggcctgacgggacgaatcgagttt
aacgatgacggcgaccggcgcttcgccacctacagcatcctgaactaccagcagaagtcc
agtcgcctggttcaggttggagtcttcaacggaacacaggttgtgatgaatcctcagagg
aagatcatctggcctggaggagagacggagaaacccgtcggataccagatgtcgaccaag
ctgaagattgtgacgatccatcaggagccgtttgtttacgtgaagccaacgaagagcgac
ggcacgtgtaaggaggagtacaccgttaacggagttctgatcaagaaggtgatctgtacc
ggacccaacgggaccatcccaggtcagcccatcgtccctcagtgctgctacgggttctgc
atcgacctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacctggtg
gctgatgggaagtttggaactcaggagcgagtgaataacagcaacaagaaggagtggaac
gggatgatgggggagctgctggggggcctggctgacatgattgtggcccccctcaccatc
aacaatgagcgcgctcagtacatcgagttctccaaaccctttaaataccaggggctcacc
atcctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccag
agcacactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttaccta
ttagaccggttcagcccgtttgggaggtttaaagtgaacagcgaagaggaggaagaagat
gccctcaccctgtcctccgccatgtggttctcatggggagttctgctgaactccgggatc
ggagaaggggctcccaggagcttctcggccaggatcctggggatggtgtgggcaggcttc
gccatgatcatcgtagcatcgtacaccgccaacctggcagccttcctggtgctggaccgg
cctgaggagcgcatcactggcatcaatgaccccaggctgcgtaacccgtcagataagttc
atctacgccacagtgaagcagagctcggtggatatctacttcagacggcaggtggagctg
agcaccatgtaccggcacatggagaaacacaactacgagagcgccgccgaggccatccag
gctgtccgagacaataagctgcacgccttcatctgggacagcgccgtgttggagttcgag
gcgtcgcagaaatgcgatctggtgacgacaggagagcttttcttccgctccgggttcggg
atcggaatgaggaaagacagtccgtggaagcagaacgtttctctggctattctcagttcc
catgaaaacggcttcatggaggatctggacaagacgtgggttcgataccaggagtgcgac
tccaggagcaacgcgcccgccaccctcaccttcgagaacatggcaggtgtgttcatgctg
gtggccggcggcatcgtggcggggatcttcctcatcttcatcgaaatcgcctacaaacgg
cacaaagatgcccgcaggaaacagatgcagctcgccttcgccgccgtcaacgtttggagg
aagaacctgcaggataggaaaagtggtagagcagagcccgagcccaaaacctcttttagg
tccatcacttcgacctccgacctcaaacgccgtatggcccctggggacgccacgccgtac
ccgaccgacatcaccggccagctcaacctatcagatccctctgtcagcaccgtggtctaa
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