Kryptolebias marmoratus (mangrove rivulus): 108249262
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Entry
108249262 CDS
T05608
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03020
RNA polymerase
kmr04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108249262 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
108249262 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108249262 (polr3a)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108249262 (polr3a)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108249262 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
108249262
NCBI-ProteinID:
XP_017294027
UniProt:
A0A3Q3AW53
LinkDB
All DBs
Position
LG17:19220937..19243724
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGIKSAEQMRKQAHIQVVSKNLYSQDAKHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKE
EKQQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTVCLQCSAFNGPVKKCGLLKIIHEKYK
TSKKVVDSFVSEFLQSFDTAIEHNKLMEPLLSRAQENLNPLVVLNLLRRIPAEDVPLLLM
NPDAGKPADLIITRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPDVHPGANF
IQNRHTQMKRFLKYGNREKIAQELKFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVKISLPHPAIMKPIALWTGKQI
FSIILKPSKDCPVNANLRTKGKQYCGKGEDLCFNDSYVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YGKCDEYIEALATGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYACPNEPALSQNELVLTADDIMKRADFVC
CRDNFLEELTETGSEKYLEEIRKFIKTTSERIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDIEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPRDIAVHGEAVVCVSPKENNKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQTGKNKYKLLVEGDNLRAVMATHGVNGNRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKANR
DPTPVTRPLLFDSADFHIPLIT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacaattcagagagacggatgtggccaaaaaaataagccatatctgcttt
gggatcaaatctgcagaacagatgagaaagcaggcccacatccaggtggtcagtaagaat
ctgtacagccaagatgccaaacacactcccctggcctatggggtgttggaccaccgaatg
ggaactagtgagaaggacagaccatgtttgacatgtgggaagaatctggcagattgttta
ggacattatggctacctggatctggagcttccgtgttttcatgttggctatttcaaagcc
atcataggaatcttacagatgatttgcaagacgtgttcgagcataatgctgacaaaagag
gagaaacagcagttcatggattacttaaaacgacccaacttggcttatcttcagaaacga
ggactgaagaagaaaatctcggacaaatgccgcaaaaggacagtctgtctacagtgttct
gctttcaatggacctgtaaaaaagtgtggcttgcttaagatcattcatgagaagtataaa
acaagcaaaaaggtggtggattcatttgtgtctgagtttctgcagtcttttgatactgcc
attgaacacaacaaactaatggagcctctgctgtccagagcacaggaaaacttgaaccct
ttagttgttcttaacttgttacgaagaattcccgcagaagacgtccctctgctgctgatg
aaccctgacgcaggaaagcctgcagatctcatcatcacccgtctcctcgtgcctcctctc
tgcatccgaccgtctgtggtcagcgacctgaagtcgggcaccaatgaggacgacctcacc
atgaagctgacagagataatctttcttaatgacgtcatcaaaaagcatcgcatgacggga
gcaaaaacccagatgatcatggaggactgggatttcctgcagcttcagtgcgctctttat
atcaacagcgaactttctggcatccccctcaacatggcgcccaaaaaatggacccgaggt
tttgtgcagagactaaagggaaagcaaggtcgattcagaggaaacctctcagggaaaaga
gtagacttctccggccggactgtcatttctcccgacccaaacctgaggatcgacgaggtg
gccgttcctgttcatgtggccaaaattctcacatacccagagagggtaaacaaagctaat
ctggaactaatgagaaaacttgtccgtaatggtcccgatgttcaccccggagccaatttt
atccaaaaccgccatacacaaatgaaaagatttttgaaatatgggaaccgtgaaaagatc
gctcaggagctgaagtttggcgatgtggtggaaagacacatgatagacggagacatcgtc
ctctttaatcgacagccttccctgcacaagctcagcatcatggcccacattgcgagagtc
aaaccacacagaacgttccggttcaacgagtgcgtgtgcacgccgtacaacgctgacttt
gacggcgatgagatgaatcttcatctgcctcagaccgaagaagccaaagccgaggccctg
atcctgatggggaccaaagccaatcttgtcacgccaagaaacggcgaacctctgattgct
gctattcaggactttctgacaggtgcgtacctgttgacgctgaaggacaccttttttgac
agatcaaaagcttgccagatagtggcatcgattcttgtgggtaaagatgaaaaagtcaag
atctccctccctcacccggctattatgaagccaattgctctgtggacgggcaaacagatc
ttcagcatcattctgaagccaagtaaggactgtccagtcaatgcaaacctgcgaacaaag
ggcaaacagtactgtggcaagggagaggatctctgcttcaatgactcctacgttgtgatt
cacaacagcgagctgatgtgcggcagcatggacaagggcaccttgggatccggctccaag
aacaacattttctacatcctgctgagagactgggggcagctggaggccgccaacgccatg
tcccgcctggcaaggctcgctccggtgtatctctccaatcggggcttttcgatcggcatc
ggtgacgtgacgcctggccagggtctgctgaaggccaaacaggacctgctggatgacggc
tacgggaagtgtgacgaatacatcgaggctttggccacgggcaagttgcagcagcagccg
ggctgcacagcggaggagaccttggaggctctcattttgagggagctctccgtgatcaga
gaccgagctggcagtgcctgtctcagggagctcgacaagagcaacagccccctcatcatg
gcgctttgtggctccaaaggatccttcattaatatctctcagatgatcgcctgtgtgggc
cagcaggccataagtggctctcgagtccctgatggttttgagaaccgctccttgcctcac
tttgaaaaacactcaaaactgcctgctgctaaaggcttcgtggccgacagcttctattct
ggtctgacgcccactgagttcttctttcacaccatggctggtcgagagggtcttgtggat
actgcggtgaaaactgcagagactgggtacatgcagagacgtctggtgaagtccctggaa
gatttgtgctcgcagtacgacctgacggtgcgcagctccactggggacattatccagttc
atttacggcggtgacggtctggatccagctgcaatggaaggaaaggacgagccgctggag
tttaagagagtcctggacaacattcgggcggtctatgcgtgtccgaatgagcctgcgctc
agtcagaacgagctcgtcctcacagcagatgacatcatgaaaagagcggacttcgtgtgc
tgcagagacaacttcctggaggaattaacagagactggctcagagaagtacctggaggag
ataagaaagtttataaagaccacgtcagaaagaatcaagaagaccagagacaaatacggc
atcaatgataacggcactactgagccaaaagttctttatcagcttgaccggatcactccc
acccagctggagaagtttctggaaacctgcagagacaagtacatgagagcccagatggag
ccgggctcggccgtaggagccctgtgcgctcagagcatcggagagcccggcactcaaatg
acactgaaaacctttcacttcgctggcgtggcatcaatgaacatcaccctgggagtcccc
cgcatcaaggaaatcatcaatgcttccaagaacataagcacccctataatcacggctcat
ttggacatagaagacgacgccgacttcgccaggctggtgaaggggagaattgagaaaact
ctgctcggagagatctcagagtacattgaagaagtttttcttccagatgactgcttcatt
cttgtgaaattgtctctggagagaataaggctgttgcgattagaggtgaatgcagaaacg
gtgcgctactctatatgcatgtctaagctgcgagtaaagcccagagacatcgctgtgcac
ggcgaagcagtggtctgcgtgtctccaaaggagaacaacaaaagctccatgtactacgtg
ctgcagtcgttaaaagaagaacttccgaaggtggtggtccagggaatacccgaggtggcc
cgagccgtcattcacatcgacgagcagactgggaagaacaagtataaactcctggtggag
ggcgacaacctgagagctgtcatggcaacgcacggcgtcaatggtaataggaccacttca
aacaacacgtatgaggttgagaagactctgggtattgaagctgcgagatccaccatcatt
aatgagattcagtacaccatggtgaaccacggcatgagcatcgaccggcggcacgtcatg
cttctcgcagatctcatgtcctacaagggggagatcctgggaatcaccaggtttggcttg
gccaaaatgaaggaaagtgtcctcatgctggcctcttttgagaaaacagccgaccacctc
tttgatgctgcctactttggacaaaaggactccgtctgcggggtgtctgaatgcatcatt
atggggattccaatgaatattggaacaggactttttaagctcctacacaaagctaacaga
gatcccactcctgtcacaaggccgcttctctttgacagcgcagacttccatatacctctg
atcacatag
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integrated database retrieval system
