Kryptolebias marmoratus (mangrove rivulus): 108250316
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Entry
108250316 CDS
T05608
Symbol
dqx1
Name
(RefSeq) ATP-dependent RNA helicase DQX1 isoform X1
KO
K14433
ATP-dependent helicase [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108250316 (dqx1)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108250316 (dqx1)
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_19
AAA_22
nSTAND3
AAA_25
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108250316
NCBI-ProteinID:
XP_017295630
UniProt:
A0A3Q2ZJ24
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All DBs
Position
LG14:complement(26839602..26847717)
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AA seq
786 aa
AA seq
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MSSPPPEAPSSSSSSQLRPSPALDSLSVSSLLSGDLDDEGGRGGGGGEEEEGLGDLEVNP
YDGLPFSSRYYALLEERQQLPAWSLRQSLLEHLENHNLVLLSAPSGSGKSTQVPQWCVEF
ALSFEFSHGLVCCSQPSSVAAASLALRVADEMDLSLGLEVGYRVPHDDSCTPDTLLRFVS
DALLLEEMMSDPLLHQYGVVILDELQERTVPTDVLLGLLCDVCRQRPDSFRVVLLSHPTL
APRLAAFLGPAVPHLSLDGLPEPPDQDGKSAGRVEILYRELPAGKEPAGASCHMVLDLHR
RGEDGDVMVFLSSSQEIDECLALLENESVALSPQLGPLRLLPLHAGLGGLTQRVYESEPD
SSAPGVRRRVILTDSLAEASFSLRGVRYVIDSGLQLKAVYNPQIRASSQVLRRISKHQAD
MRTQRITSLLPGLCLRLYPQSLYEDGMDEAHCPGVTEENLSHLVLLLKRLDIADMGQCKF
LDRPAPEALMQALEDLDYLAALDDDGNLSEVGIIMSELPLEPPLAKSLIAACEYDCVDEL
LTVAAMLTAPSCLMAAEAHREEAAAAMWRPLMHAEGDHMTLINIYNAFVEHNQDEAWCSA
NFLSHAALRLAVVIRAELLEVMQRIELPVSPPAFGSQDNCTNIKRALISGFFLRVAHDVD
GAGNYLLITHRHVAHLHPFSSYRCLQPCPSPPGWVLYHEFTVSSDNCICIASEVHPQMLV
ELAPQYFLGNLPASDGKELLMELRQSVAPPSGELDSEPQGHGRTQKDSDGTAETQNQSGT
ELCAVQ
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccctccacctgaagctcccagctcctcctccagctcccagctgagaccctcc
ccagccctggactccctgtccgtgtcctccctgctgtccggggacctggacgatgaagga
ggaagaggaggaggaggaggagaggaggaggaagggctgggggacctggaggtgaacccg
tacgatggcttacccttctcctcgcggtactacgccctcctggaggagaggcagcagctc
cctgcgtggagcctcaggcagagcctgctggaacatctggagaaccacaacttggttctg
ctcagcgcgcccagcgggtcgggaaaaagcacccaggttcctcagtggtgcgtggagttt
gcgctgtcctttgagttctcccacggcctggtgtgctgctcgcagccgtcctcggtggcg
gcggcgagcctggctctccgtgtggccgatgagatggacctgagtctgggtctggaggtg
ggctacagggttcctcatgacgacagctgcacacctgacaccttactcaggttcgtcagc
gacgccctcctgctggaggaaatgatgtcagaccccctgctgcatcagtacggcgtggtg
atcctggacgagctgcaggagcgcaccgttcccaccgacgtgctgctcggcctgctctgc
gacgtctgccgccagagacccgacagcttccgggtggtcctgctgtcccaccccacgctc
gccccccgcctcgccgccttcctcggccccgccgtccctcacctcagcctggacggcctc
cccgagcccccggaccaggacgggaagtctgcgggccgggtggagatcctgtacagggag
ctgccggcagggaaggaaccggcaggcgcttcctgtcacatggttctggatctgcaccgg
cgaggagaggacggagacgtgatggtgttcctgtccagttctcaggagatcgacgagtgt
ttggctctgctggagaacgagtctgtagctctgagtcctcagctcggaccgctcaggctc
ctccccctccacgccggactgggtggtctgacccagagggtgtacgagtctgagccggac
tcgtcggcgccgggcgtgagacgcagggtcatcctcacagactccctggctgaggcgtcg
ttctccctgcgaggagttcgttacgtcattgactcgggcctccagctcaaagctgtgtac
aaccctcagatccgagcgagctcccaggtcctgaggaggatcagcaaacatcaggcggac
atgaggacccagaggatcaccagcctgctgccagggttgtgtctccgtctctaccctcag
tccctctacgaggacggcatggacgaggcccactgtcccggtgtgactgaggagaacctc
agccacctggttctgctgctgaagaggctggacatcgccgacatgggacagtgcaagttc
ttggacagaccagctcctgaggctctgatgcaggccttggaggacctggattacctggca
gcgctggacgatgacgggaacctgtcggaggtgggaatcatcatgtcggagctgccgctg
gagccgccgctggcgaagtctctgatagccgcctgcgagtacgactgcgtggacgagctg
ctgactgtcgccgccatgcttacagctccttcctgcctgatggcagcagaagcccacaga
gaggaagctgctgcggccatgtggcgtcctctgatgcacgcagagggcgatcacatgacc
ctcatcaacatttataacgccttcgtggagcataaccaggacgaggcgtggtgctcagcc
aacttcctcagccacgccgccttacggctggcggtggtgatcagggcggagcttctggag
gtgatgcagaggatagaacttcctgtttcccccccggcgtttggaagccaggacaactgc
acgaatattaaacgtgcactcatctcaggcttcttcctcagagtggctcatgatgtcgac
ggcgcagggaactacctcctgataactcatcgccacgtggcccacctccatcccttctcc
tcctaccgctgcctccagccgtgccccagcccccccggctgggtcctctaccacgaattc
accgtctccagcgataactgcatctgcatcgcctccgaggtccacccccagatgctggtg
gagctggcgccgcagtacttcctgggaaacctgccggcgagcgacgggaaggagctgctg
atggagctccgacagagtgtggcgcccccctcaggtgagctggactcagaaccgcaggga
cacggcaggactcagaaagactccgacgggacagccgagactcagaaccagtccggcacc
gagctctgtgccgtccaatga
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