Kryptolebias marmoratus (mangrove rivulus): 108250602
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Entry
108250602 CDS
T05608
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03030
DNA replication
kmr03410
Base excision repair
kmr03420
Nucleotide excision repair
kmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108250602 (rfc4)
03410 Base excision repair
108250602 (rfc4)
03420 Nucleotide excision repair
108250602 (rfc4)
03430 Mismatch repair
108250602 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108250602 (rfc4)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108250602 (rfc4)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108250602 (rfc4)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108250602 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
108250602 (rfc4)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108250602 (rfc4)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108250602 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
108250602 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_22
AAA_11
AAA_16
AAA_30
DUF815
AAA_24
Mg_chelatase
RuvB_N
AAA_14
SLFN-g3_helicase
AAA_19
AAA_28
ResIII
AAA_5
DNA_pol3_delta
Gp44_lid
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
108250602
NCBI-ProteinID:
XP_017296047
LinkDB
All DBs
Position
LG18:1536627..1559516
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATVQTSRPQKDKAAAGPSAEKKAKAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAHLTVSGTRPDGKSCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLEICEKENLKYTKESITTLVHLSEGDLRKAITFL
QSAARLSTDKKITDHVIVEIAGVIPSKMIDNLLQLCLKGTFEKLEVAVRNMVDEGYAATQ
ILTQLHDSILEQDISDKQKSAITEKMAVVGKCLADGADEYLQILSLCSVIMQQTSQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttttaaaaggagcaactgttcaaacaagcaggccgcagaaggacaaggct
gcagcaggaccaagtgcagagaaaaaggccaaggctgttccctgggtggaaaaatacaga
ccaaagtgtgtagatgaggtggccttccaggaggaggttgtagcagtgctgaagaagtct
ttggaaggagcagatctcccaaacctgcttttctatggtcctcctggaacaggaaaaacg
tcgacaatcttagctgctgccagagaactttatggtccggagctgtacaggcagagagtg
ctggagctgaatgcctcagatgaacgaggcatacaggtcatcagagagaaagtcaagaac
tttgcgcatctcactgtgtctgggacccgtcctgatgggaagtcatgtcctcctttcaag
atcatcatcctggatgaggcagactccatgacggctccagctcaggctgccctcagacga
accatggagaaggagtctcgcacaacccgcttttgtctcatctgtaactatattagcagg
attattgagccactcacatccagatgttccaagtttcgcttcaaacctttggccaatcag
atccaagaagagcgccttctggagatctgtgaaaaggagaacctcaagtacaccaaagag
agtatcacaactctggtgcacctgtctgaaggagacctgcggaaagccatcacctttttg
caaagtgctgcacgcctcagcacggacaagaagatcactgatcatgttattgttgagatt
gcaggggttatcccttccaaaatgattgacaacttgctccaactttgtttgaaaggaacg
tttgagaaactagaggttgcagtcaggaacatggtggatgaaggttatgcagctacacag
atcctgactcagctccatgactccatcttagaacaggacatcagcgacaaacaaaagtca
gccatcactgaaaaaatggcggttgtcgggaagtgcctggcagatggagcagatgagtac
ctgcagatattgagtctgtgttcagtcatcatgcagcaaacctctcaaagctaa
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