KEGG   ORTHOLOGY: K19139
Entry
K19139                      KO                                     
Symbol
csm4
Name
CRISPR-associated protein Csm4
Brite
KEGG Orthology (KO) [BR:ko00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system
    K19139  csm4; CRISPR-associated protein Csm4
Prokaryotic defense system [BR:ko02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    K19139  csm4; CRISPR-associated protein Csm4
Other DBs
COG: COG1567
Genes
SERA: Ser39006_019910
SERQ: CWC46_19915
PCT: PC1_3259
DDC: Dd586_3235
HHZ: NCTC10839_01005
MSU: MS1648
MPEG: HV560_02215
ASEG: NCTC10977_00272
GAN: UMN179_02285
BHUD: A6A11_05950
MMAI: sS8_5538
NHL: Nhal_2833
THIP: N838_32490
BPSI: IX83_05660
NEU: NE0120
NET: Neut_2219
HCE: HCW_07145
CGRA: CGRAC_0533(csm4)
CAMZ: CVIC12175_1275(csm4)
ACLO: ACLO_a0063(csm4A)
AMOL: AMOL_0685(csm4)
HYO: NNO_2072
DOG: HP555_12295(csm4)
DOL: Dole_0741
DMM: dnm_080450(csm4-1) dnm_081430(csm4-2)
SFU: Sfum_1346
SAUB: C248_0057(csm4)
SER: SERP2458
STC: str0963
STL: stu0963
STE: STER_0976
STN: STND_0925
STW: Y1U_C0924
STHE: T303_05880
SSA: SSA_1248
SEQI: A6J79_08270(csm4)
LSJ: LSJ_0802
LRM: LRC_09950
CALE: FDN13_10375(csm4)
HSC: HVS_13865
CTHD: CDO33_09480(csm4)
FPA: FPR_24940
RIX: RO1_25780
LUA: D4A81_10685(csm4)
SWO: Swol_1753
DRM: Dred_1630
TKI: TKV_c17340(csm4)
CHY: CHY_2141(csm4)
CSC: Csac_0078
ATE: Athe_2701
CDIA: CaldiYA01_23660(csm4)
TOC: Toce_0527
KME: H0A61_00926(csm4)
VPR: Vpar_1803
MED: MELS_1367
MTU: Rv2820c
MTC: MT2887
MRA: MRA_2844
MTUR: CFBS_2974
MTD: UDA_2820c
MTUC: J113_19530
MTUE: J114_15040
MTUH: I917_19715
MTUL: TBHG_02751
MTUT: HKBT1_2962
MTUU: HKBT2_2967
MBB: BCG_2839c
MBT: JTY_2833
MBX: BCGT_2653
MMIC: RN08_3110
MHEK: JMUB5695_04023(csm4)
LFS: HFV01_08215(csm4)
NOE: CLI64_05045(csm4)
NSP: BMF81_03583(csm4)
NSPH: BDGGKGIB_01035(csm4)
RCA: Rcas_1980
CAG: Cagg_3446
HAU: Haur_2478
ATM: ANT_24520
THUG: KNN16_03620(csm4)
TTH: TT_P0105
TTJ: TTHB150(TTHB150)
TAQ: TO73_1380
MRB: Mrub_0218
BPIT: BPIT_10920
FPEI: C4N17_05440(csm4)
LHF: JCM16775_1326(csm4)
TLI: Tlie_0237
BHF: C3V43_11240(csm4)
TFO: BFO_2340(csm4)
SGN: SGRA_0214
CPC: Cpar_0081
PPH: Ppha_2451
IAL: IALB_1196
CPRV: CYPRO_3207
CACI: CLOAM0844
SAF: SULAZ_1605(csm_3)
TMA: TM1808
TMW: THMA_1854
TMQ: THMB_1854
TMX: THMC_1854
TPT: Tpet_1094
TNP: Tnap_1018
TRQ: TRQ2_1012
TME: Tmel_1673
TFE: JYK00_04590(csm4)
FNO: Fnod_1391
CABY: Cabys_2830
DTH: DICTH_0185(csm4)
DTU: Dtur_0609
DTP: JZK55_15230(csm4)
MJA: MJ_1668
MESG: MLAUSG7_1268(csm)
MESA: MLASG1_0510(csm)
MAE: Maeo_1080
MTH: MTH_1079
METK: FVF72_06195(csm4)
MTHM: FZP57_07025(csm4)
MRU: mru_1180
MMIL: sm9_1183
MOL: YLM1_0694
PHO: PH0166(PH0166)
PYS: Py04_0103
TON: TON_0896
THM: CL1_1956
TIC: FH039_06635(csm4)
MAC: MA_1934
METM: MSMTP_2844
HAAD: MW046_11005(csm4)
TVO: TVG0113769(TVG0113769)
PTO: PTO0051
ABI: Aboo_1025
SMR: Smar_0309
SCAS: SACC_15790
PAI: PAE0112
PIS: Pisl_1543
POG: Pogu_1127
TNE: Tneu_1150
TTN: TTX_1232
VDI: Vdis_1152
VMO: VMUT_1489
TPE: Tpen_1363
 » show all
Reference
  Authors
Staals RH, Zhu Y, Taylor DW, Kornfeld JE, Sharma K, Barendregt A, Koehorst JJ, Vlot M, Neupane N, Varossieau K, Sakamoto K, Suzuki T, Dohmae N, Yokoyama S, Schaap PJ, Urlaub H, Heck AJ, Nogales E, Doudna JA, Shinkai A, van der Oost J
  Title
RNA targeting by the type III-A CRISPR-Cas Csm complex of Thermus thermophilus.
  Journal
Mol Cell 56:518-30 (2014)
DOI:10.1016/j.molcel.2014.10.005
  Sequence
[ttj:TTHB150]
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