Klebsiella michiganensis HKOPL1: J415_03180
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Entry
J415_03180 CDS
T03188
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
koy
Klebsiella michiganensis HKOPL1
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koy03032
]
J415_03180 (gyrB)
03400 DNA repair and recombination proteins [BR:
koy03400
]
J415_03180 (gyrB)
Enzymes [BR:
koy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J415_03180 (gyrB)
DNA replication proteins [BR:
koy03032
]
Prokaryotic type
DNA Topoisomerases
J415_03180 (gyrB)
DNA repair and recombination proteins [BR:
koy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J415_03180 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHW86200
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Position
709903..712317
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGYCKDIV
VTIHSDNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDNKIHRQIYAHGVPQAPLAVTGETEKTGTMVRFWPSYETFTNVV
EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLNEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQISIALDGATLHTNANAPALAGEPLERLVAEYNATQKMITRMERR
YPKALLKELIYQPTLAEADLANEQTVTRWINALVSELNEKEQHGSQWKFDVRENAELQQF
EPIVRVRTHGVDTDYPLDHEFVTGPEYHRICALGETLRGLIEDDAFIERGERRQPVASFE
QALDWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPDSRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgacacggatgacggcaccggtctgcaccacatggta
ttcgaggttgtggataacgctatcgacgaagcgctcgcaggttactgtaaagacatcgtt
gttactatccacagcgacaactccgtctccgtacaggatgacggccgcggtattcctacc
ggtattcacccggaagagggcgtgtcggcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaaattcgatgataactcgtataaagtttccggtggtctgcatggcgtaggcgtt
tccgttgttaacgccctgtcgcagaagctggagctggtcattcagcgcgataacaaaatt
caccgtcagatttatgcccacggcgtgccgcaggcgccgctggcggttaccggcgaaacc
gaaaaaaccggcaccatggttcgcttctggccgagctacgaaacctttaccaacgtggtc
gaattcgaatacgagattctggcaaaacgcctgcgcgagctgtcgttcctgaactccggg
gtgtcgattcgcctgcgcgacaagcgcgacggtaaagaagatcatttccactacgaaggc
ggtatcaaagcgttcgtcgaatatctgaacaaaaacaaaacgccgatccacccgaatatc
ttctatttctccaccgaaaaagacggtatcggcgttgaagttgcgctgcagtggaacgat
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtacc
caccttgcaggcttccgtgcggcaatgacccgtaccctgaacgcctacatggataaagaa
ggctatagcaaaaaagcgaaagtcagcgccaccggcgacgatgcccgtgaaggcctgatt
gccgtggtctccgtgaaggtgccggatccgaaattctcctcgcagaccaaagacaagctg
gtctcttccgaggtgaaatcggcggtcgaacagcagatgaacgaactgctgaacgaatac
ctgctggaaaacccgtctgacgccaaaatcgtggtcggtaaaatcatcgacgcggcgcgc
gcgcgcgaagccgcacgtcgcgcgcgtgaaatgactcgccgtaaaggcgcgctggatctg
gctggcctgccgggcaagctggcggactgtcaggaacgcgaccccgcgcactctgaactg
tacttagtggaaggggactctgcgggcggctctgcgaaacaggggcgtaaccgtaagaac
caggcgattcttccgctgaaaggtaaaatccttaacgttgagaaagcgcgctttgacaaa
atgctcgcgtctcaggaagtggcgacgctgattaccgcgctgggctgcggcattggccgc
gatgagtacaacccggacaaactgcgctaccacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacattcgtacgctgctgctgaccttcttctatcgccagatgccggaa
atcgttgagcgcggacacgtctacattgcccagccgccgctgtacaaagtgaagaaaggc
aagcaggaacagtacattaaagacgacgaagcgatggatcagtaccaaatctccatcgcg
ctggatggcgccactttgcataccaacgccaacgcgccggccttagccggcgagccgctg
gagagactggttgccgagtataacgccacgcagaaaatgattacgcgtatggaacgtcgt
tatcctaaagccctgctgaaagagcttatctatcagccgacgctggcggaggccgacctg
gcgaacgagcagaccgtaacgcgctggatcaacgccctggtgagcgagctgaacgagaaa
gagcagcacggcagccagtggaaatttgatgtccgcgagaacgccgagctgcagcagttt
gagccgatcgttcgcgtgcgtacccacggcgtggataccgactacccgctggatcacgag
tttgtcaccgggccggaataccaccgtatctgcgcgctgggcgaaacgctgcgcggtctg
attgaagacgatgcctttatcgagcgcggcgaacgtcgtcagccggttgccagcttcgag
caggcgctggactggctggtgaaggagtcccgtcgcggcctctctatccagcgctataaa
ggtcttggtgagatgaacccggatcagctgtgggaaactaccatggatccggacagccgc
cgcatgctgcgcgtgaccgtcaaggacgcgattgccgctgaccagctgttcacgaccctg
atgggggacgccgttgaaccgcgtcgcgcctttatcgaagagaacgccctcaaagcggca
aacatcgatatttaa
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