Kibdelosporangium phytohabitans: AOZ06_16110
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Entry
AOZ06_16110 CDS
T04088
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
kphy
Kibdelosporangium phytohabitans
Pathway
kphy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AOZ06_16110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kphy03400
]
AOZ06_16110
Enzymes [BR:
kphy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AOZ06_16110
DNA repair and recombination proteins [BR:
kphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
AOZ06_16110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_C
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
ALG08232
UniProt:
A0A0N9HXZ7
LinkDB
All DBs
Position
3466010..3466507
Genome browser
AA seq
165 aa
AA seq
DB search
MLHEQSMPDPYRIAVVPAFPFQALAADRMTPEQLLGRVSRAGHEGLIAKLRTSKYSPGQR
PDFWLKHPLIHPKEVVVCGWRPGQNRLAGTLGGLLLGAQDPDTGNLVYIGDVGTGFSERE
RTDLQAGLHSIERARIRSRSRRRATTCAGHGQSEWMCPCEVRGVA
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgaacagtccatgcccgacccgtaccgaatcgcggtggtgcccgcgttcccg
ttccaggcgctggcggccgaccggatgactcccgagcaactgctggggcgcgtcagccga
gcgggccatgaggggttgatcgccaagctgcggacctcgaagtacagtcccggacagcgg
cccgatttctggttgaagcacccgctgatccacccgaaagaggtcgtcgtctgtggctgg
cggccgggtcagaaccggctggccgggacactcggcggactgctgcttggcgcgcaggat
cctgacaccgggaatctcgtgtacatcggtgatgtgggcacgggattctccgagcgagaa
cgcaccgacctccaggccgggctgcactcgatcgagcgcgcacgcatccgttcgcggtcg
cgccgccgcgcgacgacgtgcgccgggcacgggcagtcagagtggatgtgcccgtgcgag
gttcgcggagtggcctga
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