Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_2517
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Entry
VK055_2517 CDS
T03418
Symbol
yabO
Name
(GenBank) 23S rRNA and tRNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpt03009
]
VK055_2517 (yabO)
03016 Transfer RNA biogenesis [BR:
kpt03016
]
VK055_2517 (yabO)
Enzymes [BR:
kpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
VK055_2517 (yabO)
5.4.99.29 23S rRNA pseudouridine746 synthase
VK055_2517 (yabO)
Ribosome biogenesis [BR:
kpt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VK055_2517 (yabO)
Transfer RNA biogenesis [BR:
kpt03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
VK055_2517 (yabO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIK81114
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All DBs
Position
2563977..2564636
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AA seq
219 aa
AA seq
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MAMENYNPPQDPWLVILYQDEHIMVINKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESV
HRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWP
NRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRF
YATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaaaactacaatccgccgcaggatccctggctggtgatcctgtatcaggat
gagcacatcatggtgatcaacaagccgagcggcttgttgtccgtccccggtcgtcttgag
gagcataaagacagcgtgatgacgcgcattcagcgcgacttcccgcaggccgaatcggtg
catcgcctggatatggccaccagcggcgtgattgtggtggcgctgaataaagccgccgag
cgtgaactgaagcgtcagttccgcgagcgcgagccgaagaagcagtacgtcgcccgcgtc
tggggccatccgcagccggcggaaggcctcgtggatttaccgctgatttgcgactggccg
aaccggccaatgcagaaggtgtgctatgaaaccggcaaagcggcgcaaaccgaatatgag
gtgctggagtacgcagaggataacaccgcccgcgtgcgcctgaagccgattaccggacgg
tcgcaccagctgcgcgtgcatatgctggcgctggggcatccgatccttggcgaccgcttc
tatgccacgccggaggcgctggcgatggccccgcgcctgctgctgcacgccgagacgctc
accatcacccatcctgcctacggcaacgcgatgacctttcgcgcgccgatcgacttttaa
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