Kroppenstedtia pulmonis: GXN76_14900
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Entry
GXN76_14900 CDS
T06617
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GXN76_14900 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpul03021
]
GXN76_14900 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpul03400
]
GXN76_14900 (rpoB)
Enzymes [BR:
kpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GXN76_14900 (rpoB)
Transcription machinery [BR:
kpul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GXN76_14900 (rpoB)
DNA repair and recombination proteins [BR:
kpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GXN76_14900 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QKG85606
UniProt:
A0A7D4B3R8
LinkDB
All DBs
Position
complement(3091115..3094660)
Genome browser
AA seq
1181 aa
AA seq
DB search
MAGKLVQYGRRKRRSYERINEVLELPNLIEIQQRSYQWFLDQGLREMFQDISPIEDFTGN
LVLEFIDYNLEEPKYSVDESKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTE
TGTFIINGAERVIVSQLVRSPSVYYNSKVDKNGKPAYTATVIPNRGAWLEFETDAKDIIY
VRIDRTRKIPVTVLLRALGFSSDAEILDLLGDDEFVRNTLDKDNTGNTEKALIEIYERLR
PGEPPTADNARSLLYSRFFDPKRYDLANVGRYKMNKKLHIKNRLLNQRLAESIVDPETGE
ILAEAGQTVDRRVLNRILPLVESDEGIGWKEYSVRGGVPEDGLIQLRRFKIFSSIDDGKV
IEVISNGGVDPSVKNITPEDIIASINYFINLLHGVGTTDDIDHLGNRRLRCVGELLQNQF
RIGLSRMERVVRERMSIQDANAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSSYARINDY
GFIETPYRKVDPETQQVTDEIVYLTADEEDNYYVAQANAELDENKKFADEQVVVRYREET
IPVPSERVDFMDVSPKQVVSVATACIPFLENDDSNRALMGSNMQRQAVPLLKPEAPYIGT
GMEYKAAHDSGVTILAKRPGTVERVTAEEIWVRHEEEVDGQLVRGDLDKYKMHKYIRSNQ
GTSINQRPIVHAGEKVKAGDTLADGPSTEQGELALGRNVLVAFMTWEGYNYEDAILLSEK
LVKEDVYTSVHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERGIIRIGAEIKSGD
ILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVVDVKVFERDNSDE
LPPGVNQLVRVYIAQKRKISEGDKMAGRHGNKGVIARVLPEEDMPFLPDGTPVEVVLNPL
GVPSRMNIGQVLEIHLGMAARQMGLHMATPVFDGASEVDVFEALKEAGLDEDGKTLLYDG
RTGEPMENRVTVGVMYMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLGM
DVKILAEDEQEIEIKEIDEDEEQANEKMGLEMEGEPVDRSS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtaaactagtccaatacggtcggcgaaagcggcgcagttatgaaaggatcaat
gaggtccttgaactgcccaacctgatcgaaatccagcagagatcgtaccagtggtttttg
gatcaaggactccgagagatgtttcaggatatttcgccaatcgaagatttcacaggtaac
ttggtattggagttcattgattacaacttggaagaaccgaagtattccgtcgatgaatcc
aaggaacgggatgttacctatgcagcgccgctcagggtgaaagttcgcttgatcaataaa
gagacaggtgaagtgaaggaacaggaggttttcatgggggatttccctttgatgaccgaa
accggcacctttattatcaacggcgcggaacgcgtcattgtcagccagttggttcgttca
cccagtgtctactataacagcaaagtcgacaaaaatggaaagcctgcttacacagcgacg
gtcatcccaaatcggggtgcttggctggagtttgagaccgacgccaaagatattatctat
gtacgaatcgatcgtactcggaagatcccggtgacggtccttttgcgtgccctcgggttt
tccagtgatgccgagatactcgatttgcttggagatgacgagtttgtacgtaacaccttg
gacaaggataacacaggaaacacggaaaaagccttgattgaaatctatgaacgccttcgt
ccaggtgaaccgcccacagcggataatgctaggagccttctttattcccggttctttgac
cccaaacgttatgatctggccaatgtgggtcgatacaaaatgaacaagaagctccatatc
aagaatcgtttgctgaaccagcgattggcggagtccattgtggatccggaaacaggggaa
atcttggctgaagcgggacagactgtggaccgccgtgtgttgaaccgtattctgcctttg
gtggaaagcgatgaaggcatcgggtggaaagaatattccgttcggggcggtgtccctgag
gatggtttgatccaactgcggagattcaagatcttttcatcaatcgatgatggaaaagtg
atcgaggtgatctccaacggcggagtggatccttcggtgaaaaacattacacctgaggat
attatcgcttccatcaactattttatcaatttactccacggtgtgggaaccacggatgac
attgaccacctggggaatcgtcgtctgcgttgcgtcggggaattgcttcaaaatcagttc
aggattggactttcccggatggagcgtgtggtacgggaacgtatgtcgattcaggatgcc
aacgcgattacacctcaggctttgatcaatatccgaccggtgatcgcttctatcaaggag
tttttcggaagcagtcagctgtctcagtttatggatcagaccaaccccttggcggagctg
acgcataaacggcgtctgtctgcattggggcccggggggctgaccagggagcgtgccggc
tttgaagtacgggatgttcaccactctcactatggtcggatgtgcccgattgaaacaccg
gaaggtcccaacatcggcttgatcaactccctttcctcctatgcccggatcaatgattac
ggatttattgaaaccccctaccgaaaggtggacccggaaactcagcaggtgacggatgag
atcgtttatctgacggcggatgaagaagacaattattatgtagcccaagccaatgctgag
ttggacgaaaacaagaagtttgcggacgaacaggttgtcgttcgttatcgggaggagacg
attccggttcccagtgagcgggtggactttatggatgtatcaccgaaacaggtcgtttcg
gtggctacggcctgtatccccttcctggaaaatgacgactccaaccgggctcttatgggt
tccaacatgcaacggcaagcggttcctctcctgaaaccggaagcgccgtatatcggaacc
ggtatggagtacaaagccgcccacgactccggggttaccatattggcaaaacggcctggt
acggtggaacgggttaccgctgaagagatctgggttcgtcatgaagaagaagtggatggt
cagctggtccggggagatctggataagtataagatgcacaaatatatccgttccaatcaa
ggtaccagtattaaccagcgcccgattgtccatgccggtgaaaaagtgaaagcaggagac
actctggcagacggtccctcaacggagcagggagagttggcactgggacgtaatgttctg
gtagcctttatgacttgggaaggatacaactacgaagatgccattcttctctccgagaag
ctggtcaaagaagacgtctacacctctgtacacattgaagaatacgaaagtgaagcccgg
gataccaagttgggtcccgaggagattacccgtgatattcccaacgtcggagaagacgca
ttgaagaatctggatgaacggggaataatccgcatcggtgccgagatcaaatccggagat
attctcgtcggtaaagtgacccctaaaggggtaacagagttgacggcagaagaacgtctc
ctccatgcgatctttggagagaaggccagggaagtacgggatacatccctgcgtgttccc
cacggaaccgacggcattgtggtggacgtcaaggtgtttgaacgggataattccgatgaa
ctgcctcctggcgttaatcaactggtccgtgtttacatcgctcagaagagaaagatctct
gaaggggacaaaatggctggacgccatggaaacaaaggggttatcgccagagtactgccg
gaggaagacatgccatttttacccgatggtactccggtggaagtggtactgaaccccctg
ggtgtaccttctcggatgaatatcggacaggtgttggagattcatctggggatggctgcc
agacagatgggtctgcatatggccacaccggtttttgacggggcaagtgaagtggatgtt
tttgaagctctgaaagaagccggattggatgaagacggcaaaacactcctgtatgatggt
cgcaccggggagccgatggaaaaccgggtgacggtgggggtcatgtatatgatcaaactg
gctcacatggtggatgacaaaattcacgcccgctccaccggtccgtactctcttgtaacc
cagcaacccctgggaggaaaagcccagtttgggggacagcgtttcggggagatggaggta
tgggctttggaagcttacggagcagcctataccctgcaggaaattttgacagtcaaatcg
gatgatgtggtcggacgtgtaaaaacctatgaatccatcgtaaaaggggaaaatgtccct
gaacccggtgttcctgaatccttcaaagttctgatcaaagaactgcaaagcctgggcatg
gatgtgaaaatcctggccgaggatgagcaggagattgagatcaaagagatcgatgaagac
gaagaacaggcaaacgaaaaaatggggttggagatggagggtgagccggttgaccgatcc
tcataa
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