Klebsiella quasipneumoniae: AVR78_01705
Help
Entry
AVR78_01705 CDS
T04389
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kqu
Klebsiella quasipneumoniae
Pathway
kqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AVR78_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kqu03019
]
AVR78_01705
03016 Transfer RNA biogenesis [BR:
kqu03016
]
AVR78_01705
Enzymes [BR:
kqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AVR78_01705
Messenger RNA biogenesis [BR:
kqu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AVR78_01705
Transfer RNA biogenesis [BR:
kqu03016
]
Prokaryotic type
tRNA degradation factors
AVR78_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
SLS1_KH2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AMR13153
UniProt:
A0A1C3Q8B7
LinkDB
All DBs
Position
complement(3213118..3215253)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIEE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEVPAAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccagcataccgtgaccctggaaacc
ggcatgatggcgcgccaggcaacggccgctgtgatggttagcatggatgacactgcggta
ttcgtgaccgttgtgggccagaaaaaagcgaagccaggccaggactttttcccgctgacg
gttaactaccaggagcgcacctacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgcccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagtacaggttatcgccaccgttgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggcgcttccgcagcgctgtccctg
tctggtattccgttcaatggcccaatcggcgccgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccgacccaggaagagctgaagtccagcaaactggatctggtggtggcc
ggtaccgaagcggccgtactgatggtggaatccgaagcggaactgctgagcgaagaccag
atgctgggcgcggtggtctttggccacgagcagcagcagattgttatccagaacatcaac
gacctggtgaaagaagccggtaaaccacgttgggactggcagccggaagccgtcaacgaa
gcgctgaacgcgcgcgttgctgcgctggctgaatcccgcctgagcgatgcttaccgtatc
accgacaaacaagagcgttacgctcaggttgatgtgatcaaatctgaaaccatcgctacg
ctggttgcagaagatgaaaccctggacgctaacgaactgggtgaaatcctgcacgctatc
gagaaaaacgtggttcgtagccgcgtgctggccggtgagccgcgtatcgatggtcgcgaa
aaagatatgatccgtggtctggacgttcgtaccggcgttctgccgcgtactcacggttcc
gcactgttcacccgtggcgaaacgcaggcgctggttaccgcgacgctgggtaccgcacgc
gatgcgcagaacatcgatgaactgatgggcgagcgtaccgactccttcctgttccactac
aacttccctccgtactccgtaggtgaaactggcatggtggggtctccgaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgcggcgttctggccgtgatgccgactatcgaagaa
ttcccgtacaccgtacgggtggtgtctgaaatcaccgaatctaacggctcttcttccatg
gcttccgtctgcggtgcctctctggcgctgatggacgctggtgtgccggtgaaagccgcc
gtggcgggtattgccatgggtctggtgaaagaaggcgacaacttcgtcgtgctgtctgac
atcctcggtgacgaagaccaccttggcgatatggacttcaaagtagcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgcattgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccataccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgccctgacc
gaagagaccggtaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgact
gacggcgacaaagcacagcatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcgttcgttgcc
atcggcggcggtaaagaaggtctggttcacatctcgcagatcgctgacaagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtgccggttaaggttctggaagttgac
cgccagggccgtgtccgtctgagcatcaaagaagcaactgaacagactccgtctgccgca
gcgccggaagttccggctgccgagcagggcgagtaa
DBGET
integrated database retrieval system
