Klebsiella quasipneumoniae: AVR78_15835
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Entry
AVR78_15835 CDS
T04389
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kqu
Klebsiella quasipneumoniae
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kqu03016
]
AVR78_15835
Enzymes [BR:
kqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AVR78_15835
Transfer RNA biogenesis [BR:
kqu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AVR78_15835
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
AMR15720
UniProt:
A0A232GM78
LinkDB
All DBs
Position
complement(807532..809466)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKERESAEPESLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYVESGADGKLLLTVAIADPTAWIAEGSK
LDNAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSEAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDEATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgtgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gttgcggtgatccattctgaaaaagaacgcgaaagcgccgaaccggaatcgctggttgag
cccttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagacgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgcagaaatgcgccgtcatccattaaaaggcgac
cgcggattttacgcggagctgacccagttcattaccttcagcgacgatcacttcgtcccg
tggtgggtgacgctggcgcgccataatcttgagaaagaggcaccggacggcgtcgccacc
gagatgctcgacgaagggctgactcgccgcgatttgaccgccctcgacttcgtcaccatt
gacagcgccagtaccgaagatatggacgatgcgctgtatgtcgaatctggcgccgacggc
aaactgttgctgacggtggcgatcgctgaccctaccgcgtggattgccgaaggcagcaag
ctggataacgccgcaaaagtacgcgcctttaccaactatctgccgggcttcaacatcccg
atgctgccgcgcgaactgtcagacgacctgtgttccctgcgtgccaatgaagtgcgcccg
gtgttggcctgccggatgaccctggcggccgatggcaccatcgaagacaatatcgagttc
tttgccgctaccatcgaatcaaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagctggcagccgggcagcgaggcgatcgcgcagcaaattacgctgctg
aaggacgtgtgtcagcgccgcagcgaatggcgtcagacccacgcgctggtgtttaaagac
cgcccggattaccgtttcgtcctcggcgaaaaaggcgaagtgctggacatcgtcgcggag
ccgcgtcgtattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgtgctgcgcgacaagcttggcttcggcgtttataacgtccacaccggcttcgac
ccggcgaataccgaacagctggcggccctgctgaagacccacgacgtacacgttgatccg
acggaagtgctcaccctggaaggtttctgcaagctgcgccgcgaactggacgctcagccg
accggtttcctcgacagccgcatacgtcgtttccagtcgtttgctgaaatcagcaccgag
ccgggcccccactttggtcttggtcttgaggcctacgccacatggacctcgccgatccgt
aagtatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgaaaccatt
gcgcgcccacaggatgaagccaccgtgcagatggcggagcgccgtcgtctcaaccgcatg
gccgaacgcgatgtcgccgactggctgtatgcccgtttcctcaacgataaagccggtacc
gacacccgctttgcggcggagatcatcgacatcagccgcggtggaatgcgcgtacgtctg
gtggacaatggcgcggtcgcctttattccggccccgttcctccacgccgtgcgcgacgaa
ctggtctgcagccaggaaaacggcaccgtgcagatcaagggagaagtggtctacaaggtg
accgatgttatcgatgtcactatcgctgaagtccgcatggaaacgcgtagcatcattgct
cgtccggcagcctga
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