Kineococcus radiotolerans: Krad_0487
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Entry
Krad_0487 CDS
T00562
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kra
Kineococcus radiotolerans
Brite
KEGG Orthology (KO) [BR:
kra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kra03032
]
Krad_0487
03400 DNA repair and recombination proteins [BR:
kra03400
]
Krad_0487
Enzymes [BR:
kra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Krad_0487
DNA replication proteins [BR:
kra03032
]
Prokaryotic type
DNA Topoisomerases
Krad_0487
DNA repair and recombination proteins [BR:
kra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Krad_0487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Motif
Other DBs
NCBI-ProteinID:
ABS01977
UniProt:
A6W588
LinkDB
All DBs
Position
complement(1802589..1805480)
Genome browser
AA seq
963 aa
AA seq
DB search
MAGKSQGTRASGDGLRRLVIVESPSKIDKISTYLGPGYQVEASYGHIRDLPQPSQLPEDV
KKGPYGKFAVDVDHGFEPYYVVDDDKKKKVNELKRALKDADELILATDRDREGEAIAWHL
VQALEPRVPYRRMVFGEITREAIQQAVGELRDIDDRMVDAQETRRILDRLYGYELSPVLW
RKVRAGLSAGRVQSVATRLCVERERERMAFVAAGYADVTGTFTATGEQAGSAFSARLSSL
DGKRVATGRDFGDDGRLKASSANVAHLDVPAAQALVDGLDGASFAVRGVEEKPYTRRPAA
PFITSTLQQEASRKLRLNARQAMRTAQGLYERGYITYMRTDSVQLSSQALSAARAQAREL
YGPEYVPDSPRAYASKSKNAQEGHEAIRPAGETFRTPAQVSGELRGDDFRMYDLIWKRTV
ASQMHDARGTTATVRLGATTDDGRDAEFSASGTIITFRGFLAAYEEGRDATRDADSEGAG
DEDRRLPQVVAGDPLTASDLATAGHETSPPARYTEASLVKALEEKGIGRPSTFASIISTI
VDRGYVTYKGSALVPSWLAFAVTRLLEEHFPKLVDYDFTAGMENDLDAISRGEAERVDWL
TRFYFGAAGPTAGAVVADGPDGSGGGAALDGIKGLADDLGSIDAREISTIPIGEGIVLRV
GRYGPYLEGPDVETGELLKASVPEDIAPDEMTVDKARELLTSQSDGDNVLGQDPESGRTI
VARVGRYGPYVTELVEDDAPAPAPEEPAEGAPKKRAAKKAAKVKPRTGSLFKDMSVDSVT
LEQALQLLSLPRVVGTDPETGDEITAQNGRYGPYLKKGTDSRSLETEDQIFSITLPEVLA
IYAQPKMRRGQVAKPPLKELGADPESGQPIVIKDGRFGPYATDGTTNATLRKDDDPETVT
LERAAELLAEKRAKGPAKKTARKTATKKTAAKTTTGTATVKKTAAKKTAAKKTTARKTAA
AES
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggcaagtcccagggaacgcgagcgtccggtgacggactgcgccgactggtgatc
gtcgagtccccgagcaagatcgacaagatctcgacgtacctgggcccggggtaccaggtg
gaggccagctacggccacatccgcgacctcccccagccctcccagctgcccgaggacgtc
aagaagggcccgtacgggaagttcgcggtcgacgtcgaccacggcttcgagccgtactac
gtcgtcgacgacgacaagaagaagaaggtcaacgagctcaagcgcgccctcaaggacgcc
gacgagctcatcctcgccaccgaccgcgaccgcgagggcgaggccatcgcctggcacctc
gtgcaggccctcgaaccgcgcgtgccctaccggcgcatggtgttcggcgagatcacccgc
gaggcgatccagcaggccgtcggcgagctgcgcgacatcgacgaccgcatggtcgacgcg
caggagacccggcgcatcctcgaccgcctctacggctacgagctgtccccggtgctgtgg
cgcaaggtccgcgcggggttgtccgccggtcgcgtgcagtccgtcgccacccgcctctgc
gtggagcgcgagcgcgagcggatggccttcgtcgccgccggctacgccgacgtcaccggc
accttcaccgccaccggcgagcaggccggttccgccttctccgcccgcctgtccagcctc
gacggcaagcgcgtcgccaccggccgcgacttcggcgacgacgggcggctgaaggcgtcc
agcgcgaacgtcgcccacctcgacgtccccgccgcgcaggccctcgtcgacgggctggac
ggcgcctccttcgcggtgcgcggggtggaggagaagccgtacacccgccgcccggcggcg
ccgttcatcacctccacgctgcagcaggaggcctcccgcaagctgcgcctgaacgcccgc
caggccatgcgcaccgcgcagggcctctacgagcgcggctacatcacctacatgcgcacc
gactccgtccagctgtcctcgcaggcgctgtcggcggcgcgggcgcaggcgcgggagctg
tacgggccggagtacgtgccggactccccgcgggcgtacgcgtcgaagtcgaagaacgcg
caggaaggccacgaggcgatccgcccggcgggggagacgttccgcaccccggcgcaggtc
tccggcgagctgcgcggggacgacttccgcatgtacgacctcatctggaagcgcaccgtc
gcctcgcagatgcacgacgcccgcgggacgaccgcgacggtgcgcctcggcgcgaccacg
gacgacggccgcgacgccgagttctccgcctcgggcacgatcatcaccttccgcgggttc
ctcgccgcctacgaggaggggcgcgacgcgacccgcgacgcggactccgagggcgcgggc
gacgaggaccgccgcctgccgcaggtcgtcgcgggcgacccgctgaccgcctccgacctc
gccaccgccgggcacgagacgtccccgccggcccgctacaccgaggccagcctggtgaag
gcgctggaggagaaggggatcgggcgtccctcgacgttcgcctcgatcatctccacgatc
gtcgaccgcggctacgtgacgtacaagggctccgccctggtgccgtcgtggctggcgttc
gcggtgacgcggctgctggaggagcacttccccaagctcgtcgactacgacttcaccgcc
gggatggagaacgacctcgacgcgatctcgcgcggggaggccgagcgcgtggactggctg
acgcggttctacttcggggccgccggcccgacggccggggccgtggtcgcggacgggccg
gacggctccggcggcggggcggcgctggacggcatcaagggcctggccgacgacctcggt
tccatcgacgcccgcgagatctccaccatccccatcggggagggcatcgtcctgcgggtg
ggccgctacggcccctacctggagggtcccgacgtcgagaccggtgagctgctgaaggcg
tcggttcccgaggacatcgcgcccgacgagatgaccgtggacaaggcgcgggagctgctg
acctcgcagtccgacggcgacaacgtcctgggccaggacccggagtcggggcggacgatc
gtggcgcgggtgggccgctacgggccctacgtcaccgagctcgtcgaggacgacgccccg
gcgcccgcgccggaggagcccgccgagggggcgccgaagaagcgcgcggccaagaaggcg
gcgaaggtcaagccgcgcaccgggtcgctgttcaaggacatgtcggtggactccgtgacg
ctggagcaggccctgcagctgctgtcgctgccgcgcgtggtcgggacggacccggagacc
ggtgacgagatcaccgcgcagaacggccgctacgggccgtacctgaagaagggcacggac
tcccgctcgctggagaccgaggaccagatcttctccatcaccctgcccgaggtcctcgcg
atctacgcccagcccaagatgcggcgcggccaggtggccaagcccccgctgaaggagctc
ggcgccgacccggagtccggtcagcccatcgtcatcaaggacggccgcttcggcccgtac
gcgaccgacggcacgaccaacgcgacgctgcgcaaggacgacgaccccgagacggtgacg
ctggagcgcgccgcggagctgctcgccgagaagcgggccaaggggccggcgaagaagacc
gcgcgcaagacggcgacgaagaagacggcggcgaagacgaccaccgggaccgcgacggtc
aagaagaccgccgcgaagaagaccgcggcgaagaagacgacggccaggaagacggccgcg
gcggagtcctga
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