Kosakonia radicincitans: A3780_20490
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Entry
A3780_20490 CDS
T04579
Name
(GenBank) D-alanyl-D-alanine dipeptidase
KO
K08641
zinc D-Ala-D-Ala dipeptidase [EC:
3.4.13.22
]
Organism
krd
Kosakonia radicincitans
Pathway
krd01502
Vancomycin resistance
krd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
krd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A3780_20490
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
A3780_20490
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
krd01002
]
A3780_20490
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
krd01011
]
A3780_20490
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
krd01504
]
A3780_20490
Enzymes [BR:
krd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.13 Dipeptidases
3.4.13.22 D-Ala-D-Ala dipeptidase
A3780_20490
Peptidases and inhibitors [BR:
krd01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
A3780_20490
Peptidoglycan biosynthesis and degradation proteins [BR:
krd01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
A3780_20490
Antimicrobial resistance genes [BR:
krd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
A3780_20490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M15
VanY
Peptidase_M15_4
Motif
Other DBs
NCBI-ProteinID:
APG21087
LinkDB
All DBs
Position
complement(4464903..4465487)
Genome browser
AA seq
194 aa
AA seq
DB search
MIQDTSLVDLAERFPQLNIDMKYATTDNITGQQIYSVACCLLHSDAAKALEKSIEIARVA
GFTLKVLDAYRPQKAQAMLWRACPDQDYVLPLSQGSNHSRGTAIDVTLIDADGNVLNMGT
GFDEMNVLSHPYHPGLATPFQHNRLLLNAVMLGGGFCGIATEWWHFELPGAAAYPLIDDV
FACISPAQTDGVLP
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggatacgtctcttgtcgatctcgctgagcgattccctcagctcaacatcgat
atgaaatatgccactacggacaacattaccggtcagcaaatctacagtgtggcgtgttgc
ctgttacacagtgatgccgctaaagcgctggaaaagagtattgagatcgcacgagtggcg
ggtttcacgcttaaggtgctggacgcctatcggccacaaaaagcgcaggcgatgctctgg
cgggcctgtccagatcaagactacgtgttaccactctcgcagggatccaaccatagtcgg
ggaaccgccattgacgtcacgctgatcgatgcggacggcaacgtgctgaatatgggaacc
ggctttgatgagatgaacgtgctttcccatccttatcaccccggattggcaacccctttc
cagcataaccgactgctgctcaatgctgtgatgttaggtggaggtttctgcggtatcgcg
acggaatggtggcattttgaattaccgggagcggcggcctatccgctcattgacgatgtt
ttcgcatgtatttccccagcacagactgacggagtattaccatga
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