Kocuria rhizophila: KRH_09630
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Entry
KRH_09630 CDS
T00701
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
krh
Kocuria rhizophila
Pathway
krh00300
Lysine biosynthesis
krh00470
D-Amino acid metabolism
krh01100
Metabolic pathways
krh01110
Biosynthesis of secondary metabolites
krh01120
Microbial metabolism in diverse environments
krh01230
Biosynthesis of amino acids
Module
krh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KRH_09630 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KRH_09630 (lysA)
Enzymes [BR:
krh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KRH_09630 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAG29310
NITE:
KRH_09630
UniProt:
B2GLW9
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All DBs
Position
1047389..1048840
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AA seq
483 aa
AA seq
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MSEDTVTGHPLAPAWLRVPHDAAELDPAVFTGQYARDASGCVTVDGIPVTELAQRHGSPA
YVVSERTFRSRARRVREAFDAALEPLGVQVAVYYASKALLCTSVARWAVAEGLGIDTASG
GELAVALAAGVPGERIALHGNNKSAEELSAALDAGVGRIVVDSLPEVELLATLARQRGTR
APVMLRVTPGVHASTHEFIATAHEDQKFGLSLHAAADGEDSPALQAVAACLAQDDALELR
GLHCHIGSQIFAAEGFAQAAERVLALRETVAGRWGLALPEIDLGGGHGVAYTAADSAREI
TDIAGDLASLLAKALETSQLPAPHLSFEPGRYIAGPSGCTVYTVGTVKTVTVSPGVQRRY
VSVDGGMSDNARPVLYDADYTAVLANRVSPEAPVLSRVVGKHCESGDVVVKDVYLPGDVH
RGDLLVVPVTGAYCWSLSSNYNWLPRPGIVAVGEDGVPREIVRRESMADLLARDPGAGAD
TTS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaggacaccgtgactggccacccgctggcccccgcgtggctgcgggtgccgcat
gacgccgcggaactggaccctgcggtgttcaccgggcagtacgcgcgggacgcctccggg
tgcgtgaccgtggacgggatcccggtcacggagctcgcacaacgccacggttccccggcg
tacgtggtctcggagcgcacgttccgctcccgggcccgccgggtccgcgaggcgttcgac
gccgccctggaacccctcggggtgcaggtggccgtctactacgcctccaaggccctgctc
tgcacgtccgtggcccgctgggccgtggcggagggtctcggcatcgacaccgcctccggc
ggggaactggccgtggcgctcgccgcgggggtccccggggagcggattgcgctgcacggc
aacaacaagtccgccgaggagctctcggccgctctcgacgccggtgtgggccgcatcgtg
gtggactccctcccggaggtcgagctgctggccacgctcgcccggcagcggggaacccgc
gctcccgtgatgctgcgcgtgaccccgggggtgcacgcgtccacgcacgagttcatcgcc
accgcgcacgaggaccagaagttcgggctctcgctgcacgccgccgccgacggggaggac
tctcccgccctgcaggccgtggccgcgtgcctcgcgcaggacgacgcactggagctgcgg
gggctgcactgccacatcggctcccagatcttcgccgccgagggcttcgcgcaggcggcc
gagcgggtgctggcgctgcgggagaccgtggcagggcgctgggggctggcgctgcccgag
atcgacctgggcggcgggcacggcgtggcgtacacggccgcggactccgcccgtgagatc
accgacatcgcgggggacctcgcgagcctgctcgccaaggcgctggagacctcccagctg
cccgccccgcacctctcgttcgagcccgggcgctacatcgccgggccctccgggtgcacg
gtctacaccgtgggcaccgtcaagaccgtcaccgtgagccccggggtgcagcgccgctac
gtgtccgtggacggcggcatgagcgacaacgcccggcccgtgctctacgacgccgactac
accgcggtgctcgccaaccgggtctctcccgaggcgccggtgctctcccgcgtggtgggc
aagcactgcgagtccggggacgtggtggtcaaggacgtctacctccccggggatgtccac
cggggggacctgctggtggtcccggtgacgggtgcgtactgctggtccctgtcgagcaac
tacaactggctgccgcggcccgggatcgtggctgtgggggaggacggcgtcccgcgcgag
atcgtgcggcgcgagtccatggcggacctgctcgcccgggaccccggtgccggggcggac
acgaccagctga
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