Kocuria rhizophila: KRH_19480
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Entry
KRH_19480 CDS
T00701
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
krh
Kocuria rhizophila
Pathway
krh00250
Alanine, aspartate and glutamate metabolism
krh00310
Lysine degradation
krh00350
Tyrosine metabolism
krh00650
Butanoate metabolism
krh00760
Nicotinate and nicotinamide metabolism
krh01100
Metabolic pathways
krh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KRH_19480 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KRH_19480 (gabD)
00310 Lysine degradation
KRH_19480 (gabD)
00350 Tyrosine metabolism
KRH_19480 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KRH_19480 (gabD)
Enzymes [BR:
krh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KRH_19480 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KRH_19480 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KRH_19480 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
DUF3102
Motif
Other DBs
NCBI-ProteinID:
BAG30295
NITE:
KRH_19480
UniProt:
B2GGH9
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All DBs
Position
2238390..2239865
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AA seq
491 aa
AA seq
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MSIHDKVSAVLEATPKGLLINGEWRDASDGGTFDVENPATGEILATLASATEEDSHAAMD
AAANAQESWARTSTRERSEILRRAFDLVQEHKEDLALLMTLEMGKPLKEARGEVVYGGEF
LRWFSEEAVRHYGRYASTPEGNLKMFVSHKPVGPCLLITPWNFPLAMATRKVAPAVAAGC
TMILKPARLTPLTSQLFAKLMIEAGIPAGVLNVVSSKSASNVSDPIMADPRLRKVSFTGS
TPVGKQLMKTATDHVLRTSMELGGNGPFIVFEDADLDKAVEGAMAAKMRNMGEACTAANR
FLVHESVAEEFSQKFAAKLKALKPGNGLDEDSTVGPMVEKKALDSVNEFVQDALEKGASA
VVGGKPVDGPGYFFEPTLLTGVSEECRVFQEEIFGPVAPMTTFTDEDDAVRLANMTEYGL
ASYVFTEDISRALRIGERIEYGLLGLNVGVISNAAAPFGGVKESGVGREGGAEGIAEYTT
VQYMGMPSPWA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcatccacgacaaggtctccgccgtcctcgaggcgacccccaagggtcttctgatc
aacggtgagtggcgtgacgcctcggacggcggcacgttcgacgtcgagaaccccgcgacc
ggcgagatcctggccacgctcgcctcggccaccgaggaggactcgcatgcggccatggac
gccgccgcgaacgcccaggagtcctgggcccgcacgagcacccgcgagcgctccgagatc
ctgcgccgcgccttcgacctggtccaggagcacaaggaggacctcgcgctgctgatgacc
ctggagatgggcaagccgctgaaggaggcccggggcgaggtggtctacggcggggagttc
ctgcgctggttctccgaggaggccgtgcgccactacggccgctacgcgtccacgcccgag
ggcaacctcaagatgttcgtgtcccacaagcccgtgggcccgtgcctgctgatcaccccg
tggaacttcccgctggccatggccacccgcaaggtggcacccgccgtggccgcgggctgc
accatgatcctcaagcccgcgcgcctgaccccgttgacctcccagctcttcgccaagctc
atgatcgaggcggggatccccgcgggcgtgctgaacgtggtgtcctccaagtccgcgtcc
aacgtctcggatccgatcatggcggacccgcgcctgcgcaaggtgtccttcacgggctcc
accccggtgggcaagcagctcatgaagaccgccacggaccacgtgctgcgcacctccatg
gagctgggtggcaacggcccgttcatcgtgttcgaggacgcggacctggacaaggccgtg
gagggcgccatggccgccaagatgcgcaacatgggcgaggcgtgcaccgccgccaaccgc
ttcctggtgcacgagtccgtggccgaggagttctcgcagaagttcgcggccaagctcaag
gcgctcaagcccggcaacggcctggatgaggactccaccgtgggccccatggtggagaag
aaggccctggactcggtcaacgagttcgtccaggacgcactcgagaagggcgcgagcgcc
gtcgtgggcggcaagcccgtggacgggcccggctacttcttcgagcccaccctgctcacc
ggcgtgagcgaggagtgccgcgtgttccaggaggagatcttcggtcccgtggcgcccatg
accaccttcacggacgaggacgacgccgtgcgcctggccaacatgaccgagtacggcctg
gcctcctacgtgttcaccgaggacatctcccgcgcgctgcgcatcggcgagcgcatcgag
tacggcctgctggggctgaacgtgggcgtgatctccaacgcggcggcaccgttcggcggt
gtgaaggagtccggcgtgggccgcgagggcggcgccgagggcatcgccgagtacaccacc
gtgcagtacatgggcatgccctccccctgggcctga
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