Ketogulonicigenium robustum: BVG79_01267
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Entry
BVG79_01267 CDS
T04841
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kro
Ketogulonicigenium robustum
Pathway
kro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BVG79_01267 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kro03019
]
BVG79_01267 (deaD)
03009 Ribosome biogenesis [BR:
kro03009
]
BVG79_01267 (deaD)
Enzymes [BR:
kro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BVG79_01267 (deaD)
Messenger RNA biogenesis [BR:
kro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BVG79_01267 (deaD)
Ribosome biogenesis [BR:
kro03009
]
Prokaryotic type
rRNA helicases
BVG79_01267 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
ATP-grasp_6
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARO14613
UniProt:
A0A1W6NZP2
LinkDB
All DBs
Position
complement(1223524..1225515)
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AA seq
663 aa
AA seq
DB search
MNIPAPLAAALAEKGYASLTAVQTAAIAPETTGRDLLVSAQTGSGKTVAFGLGMARDILG
DSDKLSYAPQPLALAIAPTRELALQVARELEWLYGQAGAVIATCVGGMDYRTERRALERG
AHIVVGTPGRLRDHIDRGSLDLTGLRVAVLDEADEMLDLGFREDLEYILNAAPEDRRTLL
FSATVPSGIAALARDFQKDALRLVAGGEARQHVDISYQALSVTVRDRDNAIFNLLRFHEA
QRAIIFCKTRANVNHLLARMGNRGFKVVALSGELSQAERSHALQALRDGRAQVCIATDVA
ARGIDLPGLELVIHADLPTNPETLLHRSGRTGRAGSKGVSALIVTPADYKKAQRILRAAN
VEAEWGKAPGADDVAARDDQRMFDDAILNAPAGEESGIAATLLDRFGADHLAAAFVRLWR
SSRPTPEELSEVAAPRAPSEPRARSEFGASQWFRLSAGHVDRAEARWLLPKICDGGAITR
DDIGAIRIRENDSFVQIAVAAAPRFGDTMELAPGLIMTRHEGDIPEGRGTPAPRPARKPA
APRRSEFTSARPPREDYAPRDQKPSAPRAAAPEAVEGAAPKTRIKARWSEADKAGRKDRA
DAPRYDPDAVRPYKARTGAKPAGKPGAKPPFKAAGKTFGAKGAKPAPRSARPGGFDRPKR
GDY
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcccggcaccgctggcagcagcgcttgccgaaaaaggctatgcaagcctgacc
gccgtgcaaaccgccgcaattgcccccgaaaccactggccgcgacctgttggtgtcggcg
cagaccggttcgggcaagaccgtggccttcggccttggtatggcgcgcgacattctgggc
gacagcgacaagctgtcctacgcgccgcagcctttggcgctggccatcgcccccacgcgc
gagttggcgctgcaagtcgcgcgcgaactagaatggctgtacggccaagcgggtgcggtg
atcgccacctgcgtcggcggtatggactaccggaccgagcgtcgcgcgttggagcggggc
gcccacatcgtcgttggcacccccggccgtctgcgcgaccacatcgaccgtggctcgttg
gatctgacgggtctgcgcgtggctgtgctggacgaagctgacgagatgctcgacctcggc
ttccgcgaagatctggaatatatcctgaacgccgcccccgaagaccgccgcacgctgctg
ttttccgccaccgtgccctcgggcattgcggcgttggcgcgcgatttccaaaaagatgcc
ctgcgtctggttgcaggcggcgaggcgcgtcagcacgtcgacatcagctaccaagccctg
tcggtcaccgtgcgcgaccgcgacaatgccattttcaacctgctgcgcttccacgaagcg
caacgtgcgatcattttctgtaaaacccgcgcgaacgtgaaccacctgctggcccgcatg
ggtaatcgcggtttcaaggtcgtcgccttgtcgggcgagctgtcgcaggctgaacgtagc
catgcgcttcaggcgctgcgcgacggccgcgcccaagtctgcatcgcgaccgatgtggct
gcgcgtggtatcgacttgcccggactggaactggtgatccacgccgatctgccgaccaac
cctgaaacgctgctgcaccgctcgggccggacgggtcgggcagggtccaagggtgtttcg
gcgctgatcgtcacccccgccgactacaagaaagcacagcgcatcctgcgcgccgcgaat
gtcgaggccgagtggggcaaggccccgggtgccgacgatgtggccgcacgcgatgaccag
cgcatgttcgacgatgctatactgaacgcccccgctggcgaggaaagcggtatcgcggcc
acgctgctcgaccgctttggcgccgatcatttggcggcggctttcgtgcgtctgtggcgt
tcgtcgcgcccgacccccgaggagctgtcggaagtcgctgccccgcgcgccccgtccgag
ccgcgcgcgcgcagcgaatttggtgcatcgcaatggttccgcctgtcggcaggccatgtc
gatcgtgccgaagcccgctggctgctgcccaaaatctgcgacggtggcgcaatcacgcgt
gacgacatcggcgcgatccgcattcgtgaaaacgacagcttcgtgcagattgccgtcgcg
gctgccccgcgctttggcgacaccatggaattggcccccggcctgatcatgacccgtcac
gagggcgatattcccgaaggtcgcggcacgcccgcgccgcgccccgcgcgcaaacctgct
gcgccccgccgcagcgagtttacatcggcccgcccgccgcgcgaagattatgccccgcgc
gaccaaaagccgagcgccccgcgcgctgctgcccccgaagctgtcgaaggcgctgcaccc
aagacccgcatcaaggcccgttggagcgaagcggacaaggctggtcgtaaagaccgcgcc
gatgccccgcgctacgaccccgatgccgtccgtccctataaggcgcgcacgggtgcaaaa
ccggccgggaaacccggcgccaagccgccctttaaggcggcaggcaagactttcggggca
aagggtgccaagcccgcgccgcgcagcgcccgcccgggcggctttgatcggccgaaacgc
ggcgactactaa
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