Kocuria rosea: EQG70_11175
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Entry
EQG70_11175 CDS
T06074
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
krs
Kocuria rosea
Pathway
krs03030
DNA replication
krs03430
Mismatch repair
krs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
krs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQG70_11175
03430 Mismatch repair
EQG70_11175
03440 Homologous recombination
EQG70_11175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
krs03032
]
EQG70_11175
03400 DNA repair and recombination proteins [BR:
krs03400
]
EQG70_11175
Enzymes [BR:
krs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EQG70_11175
DNA replication proteins [BR:
krs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EQG70_11175
DNA repair and recombination proteins [BR:
krs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EQG70_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QCY33370
LinkDB
All DBs
Position
complement(2415810..2419358)
Genome browser
AA seq
1182 aa
AA seq
DB search
MTTATGKNSFTHLHVHTEYSMLDGAARLDDLFEACHELGMSSLATTDHGFVFGAFDFWNK
ARNAGIKPIIGVEAYLTPGTARSDRTRVKFADGGRDDVSGGGAYTHMTLLAETTQGMQNL
FRASSLASLEGQLYKPRMDRELLNTYGKGLIATTGCPSGEVQTRLRLGQYQEARQAAAEF
RDIFGAENYYCELMDHGLGIEKRVTGDLLKLAKDLQLPLVATNDLHYTHAEDAKSHAALL
CVQSGSTLADPKRFKFDADEFYLKSPAEMRELFRDFPEACDNTLEIAERCNVEFDTSANY
MPRFPTPEGHDEESWFVEEVQRGLHHRFPGGIPEDVQRQADYEKGIILQMGFPGYFLVVA
DFINWAKNNGIRVGPGRGSGAGSMVAYAMRITELNPLEHGLIFERFLNPDRVSMPDFDVD
FDDRRRSEVIHYVTEKYGDERVAMIVTYGTIKAKQALKDSSRVLGYPFSMGEKLTKAMPP
DVMGKGISLKDVYDESAKRYGEADELREILAQDPEAKKIFDTAEGLEGLKRQWGVHAAGV
IMSSDPLIDIIPIMRREQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDAIENITLN
QDGFVLDLENLLLDDAESYELLARGDTLGVFQLDGGPMRQLLKLMRPDNFEDISAVIALY
RPGPMGANSHTNYALRKTGQQEITPIHPELEEPLAEILNTTYGLIVYQEQVMAIAQKVAG
FTLGQADILRRAMGKKKKSELDKQYEGFHGGMVERGYSEAAIKALWDILLPFSDYAFNKA
HSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDDKDKLALYLTECRRMGITVLPPDVNES
ALNFTPVGTDIRFGMGAVRNVGANVVSAMVEAREEHGAFTSFNDFLAKVPAVVCNKRTIE
SLVKAGAFDRLGHTRRGLVLCHEEAVDATVAVKRQEAAGQFDLFGGMGLDDEDPSTSLTV
AVPDVPEWERKDLLAFEREMLGLYVSDHPLRGLDEALGQYADTSIQPLLGEDGRPDGAVV
TVAGMITSLSRRIAKTSGNAYARVELEDRTGSIEIMFFGKAYAPIAGVLAEDLICVIKGR
LQRRDDGSVTISAQELTVPELSADGHSGPVLIALPEFRATEETVKEIGAVLRNHRGDSEV
RIHLETRQKVQVLRLGPDLRVNPSPALFGDLKVLLGPTCLEV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacggcgaccggcaagaacagcttcacccacctccatgtgcacaccgagtactcg
atgctcgacggtgcggcacgcctggacgacctcttcgaggcctgccacgaactggggatg
tcctccctggcgacgaccgaccacggcttcgtcttcggggccttcgacttctggaacaag
gcccgcaacgcggggatcaagcccatcatcggcgtggaggcctacctgacgccgggcacc
gcccgctccgaccgcacccgcgtgaagttcgccgacggcggccgggacgacgtctcgggc
ggcggcgcctacacgcacatgacgctgctcgcggagaccacccagggcatgcagaacctg
ttccgcgcctcgtccctggcgtccctggagggccagctgtacaagccgcgcatggaccgc
gagctgctgaatacctacggcaagggcctcatcgcgaccaccggctgcccctccggcgag
gtgcagacccgtctgcgcctgggccagtaccaggaggcgcggcaggccgcggcggagttc
cgcgacatcttcggcgccgagaactactactgcgagctcatggaccacggcctggggatc
gagaagcgggtcaccggcgacctgctcaagctcgccaaggacctgcagctgccgctcgtg
gccaccaacgacctgcactacacccacgccgaggacgcgaagtcccacgccgccctgctg
tgcgtgcagtccggctcgacgctggcggacccgaagcggttcaagttcgacgccgacgag
ttctacctgaagtccccggcggagatgcgggagctgttccgggacttccccgaggcgtgc
gacaacaccctggagatcgcggagcggtgcaacgtcgagttcgacacctccgcgaactac
atgccccgcttcccgacccccgagggccacgacgaggagtcctggttcgtcgaggaggtg
cagcggggcctgcaccaccgcttccccggcgggatccccgaggacgtccagcggcaggcg
gactacgagaagggcatcatcctgcagatgggcttccccgggtacttcctggtggtggcc
gacttcatcaactgggccaagaacaacgggatccgggtgggcccgggccgcggctccggg
gccggctcgatggtcgcgtacgccatgcgcatcaccgagctgaacccgctggagcacggc
ctgatcttcgagcgcttcctcaacccggaccgcgtctccatgcccgacttcgacgtcgac
ttcgacgaccgccgccgctccgaggtgatccactacgtcaccgagaagtacggcgacgag
cgcgtggccatgatcgtcacctacggcaccatcaaggccaagcaggcgctcaaggactcc
tcgcgcgtgctcggctaccccttctcgatgggggagaagctgaccaaggccatgccgccg
gacgtcatgggcaagggcatctccctcaaggacgtctacgacgagagcgccaagcgctac
ggggaggccgacgagctgcgcgagatcctcgcccaggacccggaggcgaagaagatcttc
gacaccgccgagggcctcgaggggctcaagcggcagtggggggtgcacgcggcgggcgtc
atcatgtcctcggacccgctgatcgacatcatcccgatcatgcgccgcgagcaggacggg
caggtcatcacccagttcgactaccccacctccgaggggctcgggctgatcaagatggac
ttcctggggctgcgcaacctcacgatcatctccgacgcgatcgagaacatcacgctgaac
caggacgggttcgtcctcgacctcgagaacctcctgctcgacgacgccgagtcctacgag
ctgctggcccgcggcgacaccctcggggtgttccagctcgacggcgggcccatgcgccag
ttgctcaagctcatgcgccccgacaacttcgaggacatctccgcggtcatcgcgctgtac
cgtccggggcccatgggcgcgaactcgcacacgaactacgcgctgcgcaagaccggccag
caggagatcaccccgatccaccccgagctcgaggagccgctcgcggagatcctcaacacg
acctacggcctgatcgtctaccaggagcaggtcatggcgatcgcccagaaggtcgcgggc
ttcacgctcggccaggcggacatcctccgccgcgccatgggcaagaagaagaagtcggag
ctggacaagcagtacgagggcttccacggcggcatggtggagcgcggctactcggaggcc
gcgatcaaggccctgtgggacatcctcctgcccttctcggactacgcgttcaacaaggcc
cactccgccgcctacggcctcgtctcctactggacggcctacctcaaggcgcactacccg
gccgagtacatggccgcgctgctcacctcggtgggcgacgacaaggacaagctcgccctg
tacctcaccgagtgccgccggatgggcatcaccgtgctgcccccggacgtcaacgagtcc
gcgctgaacttcaccccggtgggcaccgacatccgcttcgggatgggcgcggtgcgcaac
gtgggcgccaacgtggtcagcgcgatggtcgaggcccgggaggagcacggcgccttcacc
tccttcaacgacttcctcgcgaaggtccccgccgtggtgtgcaacaagcgcaccatcgag
tccctggtcaaggccggtgccttcgaccggctgggccacacccggcgcggactcgtgctc
tgccacgaggaggccgtggacgccacggtcgccgtcaagcgccaggaggcggcggggcag
ttcgacctcttcgggggcatggggctggacgacgaggacccctcgacgtcgctgaccgtc
gcggtgccggacgtgcccgagtgggagcgcaaggacttgctggccttcgagcgcgagatg
ctcggcctgtacgtctccgaccacccgctgcgcggcctcgacgaggcgctcgggcagtac
gccgacacctcgatccagccgctgctcggcgaggacggccggcccgacggagccgtggtg
accgtggcgggcatgatcacctccctgtcccggcggatcgccaagacctcgggcaacgcc
tacgcgcgggtggagctcgaggaccggacgggctcgatcgagatcatgttcttcggcaag
gcctacgcccccatcgcgggcgtgctcgcggaggacctcatctgtgtgatcaagggccgg
ctgcagcgccgggacgacgggtcggtgacgatctccgcgcaggagctcaccgtgccggag
ctctcggcggacgggcacagcggccccgtgctgatcgccctgcccgagttccgcgccacg
gaggagacggtcaaggagatcggcgcggtgctgcgcaaccaccgcggggactccgaggtg
cgcatccacctcgagacccgccagaaggtgcaggtcctgcgcctgggccccgatctgcgg
gtgaacccctcaccggcgctgttcggggacctcaaggtgctgctcggcccgacctgcctg
gaggtgtag
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