KEGG   Kosakonia sacchari: C813_02530
Entry
C813_02530        CDS       T03601                                 
Name
(GenBank) RNase II stability modulator
  KO
K14051  c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
Organism
ksa  Kosakonia sacchari
Pathway
ksa02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ksa00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C813_02530
Enzymes [BR:ksa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     C813_02530
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS PAS_4 GGDEF_2 PAS_10
Other DBs
NCBI-ProteinID: AHJ73765
LinkDB
Position
complement(2260898..2262889)
AA seq 663 aa
MKDFQEQNLLFRYLGSTSPFWRLTADSNALHFAPDENADVSQVVALSDEQAARIREMTVI
TSSLSMHLSLFGEDVAVHLVGRKISRKAWAGSASAWHDTTSVARDLVQSLSFAEQVVSEA
NSVIVILDKHGNIQRFNRLSEEYTGMKEQEVIGQNVFKLFMSRSEAVASKRNISGFFRDG
TPYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHELISDAISARGETQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEGQVLARLGGDEFIVLATDTSQSLLEAMASRILTRLRQPFRIGLIEVYTGCSLGI
SLAPQHGNDRESVIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDKE
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGIFVRVAVNVSARQLADQTIFSDLKQALLDLKFEYCPIDVELTESCLIENE
ELALSVIQQFSALGAQVHLDDFGTGYSSLSQLARFPLDAIKLDQSFVREVHKQPISQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAVFERWFRRYQAR
KSR
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaaagactttcaggaacagaacctgctgtttcgctacctgggttcgacaagccccttt
tggcgtttaaccgccgacagtaacgctctgcactttgctccggacgaaaacgccgatgtc
agccaggttgttgcgttgagcgacgaacaagctgcgcgcatccgcgaaatgacggtcatt
acatccagcctatcgatgcatctctctttattcggcgaggacgttgccgttcaccttgtc
ggcagaaaaatatcccgcaaagcctgggccggtagcgcatcggcatggcacgatacaacg
tcagtggcgcgcgatctggtgcaaagcctctccttcgcagagcaggttgtttccgaagcg
aattcagtgatagtgatcctcgataagcacggcaatattcagcgatttaatcgcctgagc
gaagaatacaccggcatgaaagaacaagaggttattgggcaaaacgtttttaaactgttt
atgagccgcagcgaagcggtggcctcaaaacgcaacatcagcggcttttttcgtgacggt
acgccgtatgaagttgaacgctgggttaaaactcgtaaaggccagcgcttatttctgttt
cgcaataagtttgtccacagtggcagcggtaaaaatgaaatttatctcatttgttctggt
acagatattaccgaagagcggcgcgcgcaggagcgactgcgggttctcgccaacaccgac
acggtgaccggtttacccaatcgcaacgccattcacgagttaattagcgatgcgataagc
gcgcgcggagaaacgcaggtcggtgttgtctacctcgatcttgataactttaaaaaagtg
aatgatgcctatggccatatgttcggcgatcagctcttgcaggcggtcgcgctggccata
ctaagttgcctggacgaaggccaggtgcttgccagactcggcggtgatgagtttatcgta
ctggcaacagatacctcacagagcctgctggaagcgatggcatcgcgcattctgacccgt
ttacggcaaccattccgtatcggccttatcgaagtttacaccggctgctcgctgggcatt
tcactggccccacagcacggtaatgatcgcgaaagcgtgatccgtaacgccgacacggcg
atgtataccgctaaagagagtgggcgcggcaaattttgcgtcttctcccctgaaatgaat
caacgagtatttgaatatttatggctcgataccaatctgcgtaaagcgctggataaagag
caactggtgatccattaccagccgaagatcacctggcgcggcgaagtgcgcagccttgaa
gcgctggtacgctggcaatcgccggagcgcggcttgatcccgccgctggactttatctcg
tatgccgaagagtctggcctgattgtgccgctggggcgctgggttatgctggatgtggtg
cgtcaagtggcgaaatggcgcgacaaaggcatatttgttcgcgtcgcggtgaacgtctct
gcgcgtcaactggcggatcagacgattttcagcgatttgaaacaagcgctgctggatctt
aaatttgaatattgcccaatcgatgtggagctaaccgagagttgtttgattgaaaacgag
gagctggcgctgtcggttattcagcagttcagtgccctgggcgcgcaggtgcatcttgat
gacttcggcaccggctactcttccctttcacaactggcgcgctttccgctggatgctatc
aaactcgatcaatcttttgtccgcgaagtgcataagcagccgatatcacaatcgctggtg
cgggcgatagtcgccgttgcccaagcgcttaatttgcaggtgattgccgaaggtgtggag
aatgcaaaagaagacgcctttcttacaaagaatggcgtcaatgaacggcagggtttttta
tttgccaaaccaatgcccgctgccgtattcgagcggtggttcaggcgttatcaggcacgt
aaatcgcgttag

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