Kosakonia sacchari: C813_02530
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Entry
C813_02530 CDS
T03601
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ksa
Kosakonia sacchari
Pathway
ksa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C813_02530
Enzymes [BR:
ksa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
C813_02530
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AHJ73765
LinkDB
All DBs
Position
complement(2260898..2262889)
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AA seq
663 aa
AA seq
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MKDFQEQNLLFRYLGSTSPFWRLTADSNALHFAPDENADVSQVVALSDEQAARIREMTVI
TSSLSMHLSLFGEDVAVHLVGRKISRKAWAGSASAWHDTTSVARDLVQSLSFAEQVVSEA
NSVIVILDKHGNIQRFNRLSEEYTGMKEQEVIGQNVFKLFMSRSEAVASKRNISGFFRDG
TPYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHELISDAISARGETQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEGQVLARLGGDEFIVLATDTSQSLLEAMASRILTRLRQPFRIGLIEVYTGCSLGI
SLAPQHGNDRESVIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDKE
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGIFVRVAVNVSARQLADQTIFSDLKQALLDLKFEYCPIDVELTESCLIENE
ELALSVIQQFSALGAQVHLDDFGTGYSSLSQLARFPLDAIKLDQSFVREVHKQPISQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAVFERWFRRYQAR
KSR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactttcaggaacagaacctgctgtttcgctacctgggttcgacaagccccttt
tggcgtttaaccgccgacagtaacgctctgcactttgctccggacgaaaacgccgatgtc
agccaggttgttgcgttgagcgacgaacaagctgcgcgcatccgcgaaatgacggtcatt
acatccagcctatcgatgcatctctctttattcggcgaggacgttgccgttcaccttgtc
ggcagaaaaatatcccgcaaagcctgggccggtagcgcatcggcatggcacgatacaacg
tcagtggcgcgcgatctggtgcaaagcctctccttcgcagagcaggttgtttccgaagcg
aattcagtgatagtgatcctcgataagcacggcaatattcagcgatttaatcgcctgagc
gaagaatacaccggcatgaaagaacaagaggttattgggcaaaacgtttttaaactgttt
atgagccgcagcgaagcggtggcctcaaaacgcaacatcagcggcttttttcgtgacggt
acgccgtatgaagttgaacgctgggttaaaactcgtaaaggccagcgcttatttctgttt
cgcaataagtttgtccacagtggcagcggtaaaaatgaaatttatctcatttgttctggt
acagatattaccgaagagcggcgcgcgcaggagcgactgcgggttctcgccaacaccgac
acggtgaccggtttacccaatcgcaacgccattcacgagttaattagcgatgcgataagc
gcgcgcggagaaacgcaggtcggtgttgtctacctcgatcttgataactttaaaaaagtg
aatgatgcctatggccatatgttcggcgatcagctcttgcaggcggtcgcgctggccata
ctaagttgcctggacgaaggccaggtgcttgccagactcggcggtgatgagtttatcgta
ctggcaacagatacctcacagagcctgctggaagcgatggcatcgcgcattctgacccgt
ttacggcaaccattccgtatcggccttatcgaagtttacaccggctgctcgctgggcatt
tcactggccccacagcacggtaatgatcgcgaaagcgtgatccgtaacgccgacacggcg
atgtataccgctaaagagagtgggcgcggcaaattttgcgtcttctcccctgaaatgaat
caacgagtatttgaatatttatggctcgataccaatctgcgtaaagcgctggataaagag
caactggtgatccattaccagccgaagatcacctggcgcggcgaagtgcgcagccttgaa
gcgctggtacgctggcaatcgccggagcgcggcttgatcccgccgctggactttatctcg
tatgccgaagagtctggcctgattgtgccgctggggcgctgggttatgctggatgtggtg
cgtcaagtggcgaaatggcgcgacaaaggcatatttgttcgcgtcgcggtgaacgtctct
gcgcgtcaactggcggatcagacgattttcagcgatttgaaacaagcgctgctggatctt
aaatttgaatattgcccaatcgatgtggagctaaccgagagttgtttgattgaaaacgag
gagctggcgctgtcggttattcagcagttcagtgccctgggcgcgcaggtgcatcttgat
gacttcggcaccggctactcttccctttcacaactggcgcgctttccgctggatgctatc
aaactcgatcaatcttttgtccgcgaagtgcataagcagccgatatcacaatcgctggtg
cgggcgatagtcgccgttgcccaagcgcttaatttgcaggtgattgccgaaggtgtggag
aatgcaaaagaagacgcctttcttacaaagaatggcgtcaatgaacggcagggtttttta
tttgccaaaccaatgcccgctgccgtattcgagcggtggttcaggcgttatcaggcacgt
aaatcgcgttag
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