Candidatus Kinetoplastibacterium sorsogonicusi: CKSOR_00165
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Entry
CKSOR_00165 CDS
T05428
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
kso
Candidatus Kinetoplastibacterium sorsogonicusi
Pathway
kso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKSOR_00165 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kso03400
]
CKSOR_00165 (alkA)
Enzymes [BR:
kso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CKSOR_00165 (alkA)
DNA repair and recombination proteins [BR:
kso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKSOR_00165 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Gp7_helical
HHH
Motif
Other DBs
NCBI-ProteinID:
AWD32297
UniProt:
A0A3Q8ER48
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All DBs
Position
167512..168156
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AA seq
214 aa
AA seq
DB search
MEFNNKYLQEPIYWHEATSYLLKKDRILKKIIPLCNKNFSIFSENYFQILSKAIICQKIS
NIANETVDNIWNIFKNKIFLDPYSILITSKDTLKSMGVNNRKANYLYHLALSFCEKKVKY
EDWNTMDNESIVKELLSIKGIGRWTAEIFLMFGMQRPDIMPLDDKDLLKAISFHYFSGEP
VSRFEAREVSVAWKPWRTVASYYLWQSLNFLPIK
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaataacaaatatttacaagaaccaatttattggcatgaagctacatcatat
ttattgaaaaaagatagaattttaaaaaaaattatccctttatgtaataaaaatttttca
attttttctgaaaattattttcaaatattatctaaagctataatatgtcaaaaaatttct
aatattgctaatgaaactgtagataatatatggaatatatttaaaaataaaatattttta
gatccatattctattttaataacatctaaagatactttaaaatctatgggggtaaataat
agaaaagcaaattatttgtatcatttagcattaagtttttgtgaaaaaaaagtaaaatat
gaagattggaatactatggataatgaatctatagttaaggaacttttatctataaaagga
ataggaagatggactgcagaaattttcttaatgtttggtatgcaacgaccagatataatg
cctttagatgataaagatttattaaaagctatatcttttcattattttagtggagaacca
gtttcacgttttgaggctagagaagtatctgtagcatggaaaccttggagaacagttgca
agttactatttatggcaaagtttaaattttttaccaattaaatga
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