Kurthia zopfii: NCTC404_00309
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Entry
NCTC404_00309 CDS
T05934
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
kzo
Kurthia zopfii
Brite
KEGG Orthology (KO) [BR:
kzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kzo03400
]
NCTC404_00309 (addA)
Enzymes [BR:
kzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC404_00309 (addA)
DNA repair and recombination proteins [BR:
kzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC404_00309 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_22
CtsR_C
Motif
Other DBs
NCBI-ProteinID:
VEI04953
LinkDB
All DBs
Position
1:complement(315308..318991)
Genome browser
AA seq
1227 aa
AA seq
DB search
MIPIKPATVTWTDAQWQAIWAKGQDTLVSAAAGSGKTAVLINRMIEKVIDTTNPIDVDQL
LVVTFTNASAAEMRQRMASALEEAIEKDPTSKHLRRQLSLINKAQISTLHSFCLNIIRQY
NYLLDIDPGFRIANDTEAALLRDDTMAEILEEAYAVENPQQIYQLVDAFTSDRDDQAIEI
LISQLFEMSRVNPEPDQWLNHLPAAYDVSDINTIDELAITATIKQSILLNIDAAIHLIQE
MHQVALKPDGPDAFGATTEKDLTKLTTGRVLVETGSWSEAAAFFATHKWDRLASQKKDSC
DESLKELAKSKREQAKKIIDDSVKVYFQRPEEKLIEEIAVMKPLIQTLVELTQQFSDRYA
FAKAEKGLIDFSDLEHFALNILTEENLQPSEVAKEYQRKFAEVLVDEYQDTNRLQETILQ
LIKTGESHDGNMFMVGDVKQSIYRFRLAEPTLFLNKYLLYKDQPEQFGLKIDLNANFRSR
AEVLDGTNYIFKQIMGNTVGEIDYDDEARLKPSAPYPDQEVPITLAVIHEEEKEEVEQSE
EQEELEEMKKSQQEARFIIAEIQHLMNSGQLVYDAFKKDENDEPFSRPLEYRDIVILMRS
MTWSSDFVEEFKLAGIPLYAELSRGYFEAIEVMVMMNTLRVIDNPYQDIPLVSVLRSPFI
GLAENDLSKIRLADPKAPFFDALKKFVSEEQSISQEVAEKLQRFLFMLEDWRDMARRGSL
ADLIWQVYLDTNYYEMVGAMVNGKQRQANLRVLHDRAISYEKTSFRGLFRFLRFIDRMRL
RGDDLGTAKAVSQSENVVRVMTIHSSKGLEFPYVFAAGMGRPFNRMDFNQSYLFDPEFGL
AVKMIDPEKRIQHTSLPYLAMKEKKLLEMKAEEMRILYVAMTRAKEKLYLVGSVKDWLKT
KDRWEEALNLPKGEPLPDHQRAKANSYFDWIGPAVARHPDYLRDVLTGEMIESSEPSKWS
IKVIERDLLTTQTQEEKLVETPTIEENEDFSMVIENTLGYQYPFASSTIKKSKTSVSEMK
RLKLLESLEEPEFEWAPTPIKEEVKEGRRPKFLQKQEMTGAEKGTAVHAVMEHIPQQGFE
SEEAVNQFIETLVKRQLITEKEAQAVSAKDILLFLDSEIGRQFRIAPILYRELPFTKAVV
DQQNDTQLIQGIVDCLYQTTEGDWIILDYKTDRVTGSMKTTEGLEKELKRRYAIQLNTYK
DAVEAILQITISHSVIYAFDAHKWLNV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgattccaattaagccagctacggttacttggacggatgcacagtggcaagccatttgg
gcgaaaggtcaggacacacttgtatcagcagcagcagggtcaggaaagacagctgtatta
atcaaccgcatgattgaaaaagtaatcgatacgaccaatccgattgatgtagaccaatta
cttgtcgtgacatttacgaacgcctcagcagctgaaatgcgtcaaagaatggcgagtgct
ttagaagaagcgattgaaaaagatcctacttctaaacatttacgccgacaattaagttta
attaacaaagcacaaatttctacattgcattcattttgtttaaatattattcgccaatat
aattacttgctcgatattgatccaggattccgcatcgccaatgatacagaagcggcatta
ttacgcgacgatacgatggctgagattttggaagaagcttatgctgtcgaaaatccccag
caaatttatcaacttgtcgatgcttttacatctgatcgagatgaccaagcaattgaaata
ctcatttctcaattatttgagatgtcacgtgtaaatcctgagccggaccaatggctgaac
catttaccagcagcatatgatgtttcggatattaatacgattgatgaattagcgattaca
gctacgattaagcaatcaattctattaaatatcgatgcagcgattcatcttattcaagaa
atgcatcaagttgctttaaaacctgatggtccagatgcattcggtgctacgactgagaag
gatttaacgaagttgacgaccggacgtgttctagtcgaaacaggttcgtggagtgaagcg
gctgccttttttgcgacgcataaatgggatcgactagcttcgcagaaaaaggattcttgc
gatgaatcattgaaagaactcgcaaaaagtaaaagggaacaagcgaaaaagataatagat
gattcggtaaaagtatatttccaacgccctgaagagaagctcattgaagaaattgcagtg
atgaagccattgattcagacgttagtagagctgacgcagcaatttagcgaccgctatgca
ttcgcaaaggcggaaaaaggtttaatcgacttttcggatttagaacattttgcattgaat
attttgacagaggaaaatcttcaaccttcagaagtagcgaaggaatatcagcgaaaattt
gcggaagtattagtcgatgaatatcaagatacgaaccgattacaagaaacgattttacaa
ttgattaagacaggcgagtcacatgacggtaatatgttcatggttggggacgtaaaacag
tcgatttatcgatttagattagctgaacctactttatttttaaataaatacttattgtat
aaagatcagcctgaacaattcggattgaaaattgatttaaatgcgaatttcagaagtcgt
gcagaagttttagatggaacgaactatatttttaaacagatcatgggtaatacagtcggc
gagattgactatgatgatgaagcgagattgaaaccatctgctccttatccagatcaagaa
gtgccgattactttagcggttattcatgaggaagagaaagaagaagtcgagcaaagtgaa
gagcaggaagagctagaagagatgaagaaatctcagcaagaagcacgctttattattgcg
gaaattcaacatttgatgaactcgggacaacttgtatatgatgcattcaaaaaggatgaa
aatgatgaaccgttcagtcgtcctttagaatatcgtgacattgtcatattgatgcgttca
atgacttggtcgagcgatttcgtagaggaattcaagttagcaggtatcccactttatgcg
gaactatcgagaggctattttgaagcaattgaagtaatggtcatgatgaatacacttcga
gtgatcgataatccgtatcaagatatccccttagtatccgtattacgctcacctttcatc
ggtttagcagaaaatgatttatcgaaaattcgtttagcagatccgaaagcgcctttcttc
gacgcactcaaaaaatttgtgagtgaagaacaatccatctcacaagaagttgcggaaaaa
ttacaacgatttttattcatgttggaagattggcgagatatggcacgccgaggttcatta
gctgatttaatatggcaagtctatttagatacgaactactacgaaatggtcggagctatg
gtgaatgggaagcagcgtcaagcaaatttacgtgtcctgcatgatcgcgctatttcatat
gaaaaaacatcgttccgaggattattccgcttccttcgtttcattgaccgcatgcgatta
cgtggcgatgatttaggaacagcaaaagctgtgagtcagtctgaaaatgtcgtacgtgtc
atgacaattcactcatccaaaggtttggaattcccatatgtttttgcggctggaatgggc
agaccgttcaatcgaatggacttcaatcaatcgtatttatttgatccggaattcggttta
gcagtgaaaatgattgaccctgaaaaacgtattcaacacacttcattgccatatttagcg
atgaaagagaaaaaactacttgagatgaaagctgaagaaatgcgtattctctatgtggcg
atgacgcgtgcgaaggaaaaactatatttagtcggcagtgtgaaagattggttgaaaacg
aaggatcgttgggaagaagctttaaatcttccaaaaggcgaaccattgccggatcaccaa
cgtgctaaagcgaatagttacttcgattggattgggccagcagttgcgcgccatccagat
tatttacgtgatgtgttaacaggcgaaatgattgaatcaagtgaaccatcgaaatggtcg
attaaagtaattgaacgagatctgttgacgactcaaactcaagaagaaaagcttgtcgaa
acacctacaatcgaagaaaatgaagatttctcaatggtcattgaaaatacattagggtat
caatatccatttgctagttcgactattaaaaaatctaaaacttcggtttcagaaatgaag
cgacttaaacttcttgaaagtctggaagaacctgagtttgaatgggctccaacaccaatc
aaagaagaagtgaaagaaggaagacgaccgaaattccttcaaaaacaagaaatgacaggt
gctgaaaaaggtactgcagtccatgcggttatggaacatataccacagcaaggatttgaa
tcagaggaagcagtgaatcaatttattgaaacgcttgtgaagcgtcaattaattactgaa
aaagaagcgcaggcagtaagtgcaaaagatattttactatttttagattctgaaattggt
cgtcaatttagaatagcccctattttatatagagaattgccgtttactaaagcagttgtt
gatcagcaaaatgatacacaattgatacaaggtattgtcgattgtctatatcaaacgact
gaaggggattggataattctagattataaaacagaccgcgtgaccggtagtatgaagacg
acggaaggtttagaaaaagaattgaaacgtagatacgccatccagctgaacacatataaa
gatgcagttgaggcgattttacaaattacaataagtcattccgtaatttacgcatttgat
gcgcataaatggttgaatgtatag
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