KEGG   Lysobacter antibioticus 76: LA76x_2747
Entry
LA76x_2747        CDS       T04154                                 
Name
(GenBank) DEAD/DEAH box helicase family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.13 5.6.2.4]
Organism
lab  Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:lab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lab03400]
    LA76x_2747
Enzymes [BR:lab01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     LA76x_2747
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LA76x_2747
DNA repair and recombination proteins [BR:lab03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LA76x_2747
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH PhoH AAA_25 DUF5805 DprA_WH
Other DBs
NCBI-ProteinID: ALN80877
UniProt: A0A0S2FBQ6
LinkDB
Position
complement(3180192..3184613)
AA seq 1473 aa
MVLDDFHPAIAAWFRSAFPAPTQAQELAWPAIRAGRNTLVAAPTGSGKTLTAFLAAIDAL
VCEGLAQGLRDETAVVYVSPLKALSNDIHLNLEAPLAGIGEALRGMGLDEPGIRTAVRTG
DTPASERQSMRRKPPHILVTTPESLYVLMGSESGRAMLSTVRTVIVDEIHAVADDKRGSH
LSLTLERLRELCAQPPVRIGLSATQKPIDEVARFLVGADAVDAAGRPDCAIVDIGYAKQR
DLALELPGSPLSAVMSHEQWDEVYERLAALVGEHRTTLVFVNTRRMAERAARHLADRLGK
DAVAAHHGSLARELRLDAEQRLKRGELRVLVATASLELGIDIGDIDLVCQLGSPRAIAAF
LQRVGRAGHHVGGVPKGRLFPQSRDDLVECAALLDSVRRGELDALQIPSAPLDVLAQQIV
AEVGSQEWGEDALYACLRCAWPYAGLQRKDFDAVVRMLADGFTTRRGPRSAYIHRDAVHG
RLRARRGSRMIAVMSGGTIPDTGDYTVLLEPEAVTIGNVNEDFAIESLAGDVFQLGNASY
RILRVEPGRVRVEDAQGQPPNIPFWLGEAPGRSDELSASVSRLREAVENLLAASPQAGEA
ARSLSEAFGFDAETAIQVVDYLGRTRQALGVVPSQDRLVFERFFDESGGTQLVIHSPYGS
RINRAWGLALRKRFCRKFNFELQAAATEDAIVLSLSTSHSFPLEDVARYLHSASALDVLT
QALLDAPLFAVRWRWSATTALALPRFVGGRKVAPQLQRMKSEDLLATVFPDQVACAENLV
GEREVPDHPLVAQTLHDCLYEAMDSAGWLRMLRRLELGEVQVIGRDVTAPSPIAAEAINA
RPYAFLDDAPLEERRTQAVMARRYAEADSAGDLGRLDPEAIEAVRGEAWPEVRDADEMHE
ALMGLGFVTIAEAAANDWPRWLTALADSGRATALRLSASDPAPAWWVATENLPQARALFA
EALAEPAVAVPEEYLATAWSGEEALVELLRSRLTALGPTTLAALARDSRRDAGEIELALL
RLEQEGYVMRGRFGRDSLLGGDEEWCERHLLARIHRYTVGRLRREIEPVEPRDFARFLFD
WQHLTASTRMHGPQALRAVLEQLEGYEAPASVWESELLPARIADYDSSWLDELCSAGRVT
WARLRPDANAGAVNGAAAAPVPQGVPSVRQTPIVLLPRRALAEWRLAAGRKADPAPVSSR
AQRVLAALEARGASFFDELERDAHLLRTELEEALGELVTRGRITCDSYAGLRALLVPPSK
RVSTHGARRRRALLTDLQDAGRWSLTGPAEGEGAPADAARNAEANEHIAWRLLERYGVVF
WRLIQREAAWLPPWRDLLRVYRRLEARGEIRGGRFVSGMSGEQFALPDAVNSLRQIRQRG
RDGAVVCVSAADPLNLTGSVLAGVKVPRIPGARIAFRDGVAVASLLAGQVEELVELPADI
QREVHRLLLRRPGSAAAAAEASIAEVMRNLALR
NT seq 4422 nt   +upstreamnt  +downstreamnt
atggtcctcgacgacttccatcccgccatcgccgcctggttccgctcggcgtttccggcg
ccgacccaggcccaggaactcgcctggccggcgatccgcgccgggcgcaacaccctggtg
gcggcgccgaccggctccggcaaaaccctgaccgcgttcctggcggcgatcgacgcgctg
gtgtgcgaagggctcgcacaggggctacgcgacgaaaccgcggtggtctatgtttcgccg
ttgaaggccttgtcgaacgacatccacctcaatctcgaagcgccgctggccgggatcggt
gaggcgctgcgcggcatgggcctggacgaaccgggcatccgcaccgcggtgcgcactggc
gacaccccggcgagcgaacgtcagtcgatgcggcgcaagccgccgcacatcctggtgacg
acgccggagtcgctgtacgtgttgatgggctcggaatcgggccgggccatgctctcgacc
gtgcgcacggtgatcgtcgacgagatccacgccgtcgccgacgacaagcgcggcagccat
ctcagcctgaccctcgagcgcttgcgcgagttgtgcgcacagccgccggtgcggatcggt
ttgtcggcaacgcagaagccgatcgacgaagtggcgcggttcctggtcggcgccgatgcg
gtcgacgcggccggccgcccggattgcgcgatcgtcgacatcggctacgccaagcagcgc
gatctggccctggaactgccgggctcgccgctgtcggcggtgatgtcgcacgagcaatgg
gacgaagtctacgaacgcctggcggccctggtcggcgaacatcgcaccaccctggtgttc
gtcaacacccggcgcatggccgaacgcgccgcgcgccatcttgccgaccgcctcggcaag
gacgcggtcgccgcgcaccacgggagcctggcgcgcgagctgcgcctggacgccgagcaa
cggctcaagcgcggcgaactgcgggtgctggtggcgaccgcctcgctggaactgggcatc
gacatcggcgacatcgacctggtctgccaactcggttcgccgcgtgcgatcgccgccttc
ctgcaacgcgtcggccgcgccggccaccatgtcggcggggtgccgaaggggcgtttgttc
ccgcagtcgcgcgatgacctggtcgaatgcgcggccttgctcgacagcgtgcgccgcggc
gagctggacgccttgcagattccgtcggcgccgctggacgtattggcccagcaaatcgtc
gccgaggtcggctcgcaggaatggggcgaggacgcgctgtacgcctgcctgcgctgcgcc
tggccctatgccgggctgcagcgcaaggatttcgatgcggtcgtgcgcatgctggccgac
ggcttcaccacccggcgcgggccgcgttcggcctatatccatcgcgacgccgtgcacggc
cgcctgcgcgcgcgacgcggcagccgcatgatcgcggtgatgtcgggcggcaccattccc
gataccggcgactacacggtgctgctcgaacccgaggccgtcaccatcggcaacgtcaac
gaggacttcgccatcgaaagcctcgccggcgacgtgttccagctcggcaacgccagctac
cgcatcctgcgggtcgagccggggcgggtgcgggtggaggacgcgcagggccagccgccg
aatattccgttctggctcggcgaagcgccaggccgcagcgacgaactgtcggcaagcgtg
tcgcgattgcgcgaggcggtggagaacttgctggcggcgtcgccgcaggctggcgaagcc
gcgcgttcgctcagcgaggcttttggtttcgatgccgagaccgcgatccaagtcgtcgac
tacctcggccgcacgcgccaggcgctgggtgtggtgccgagtcaggatcggctggtgttc
gagcgcttcttcgacgaatccggcggcacccagctggtgatccattcgccctacggcagc
cgcatcaaccgcgcctggggcctggccctgcgcaagcgtttctgccgcaagttcaatttc
gaattgcaggccgcggccaccgaggacgccatcgtgctgtcgctgtcgaccagccacagc
ttcccgctcgaagacgtcgcccgctatctgcactcggcttcggccctggacgtgctgacc
caggccttgctggatgcgccgctgttcgcggtgcgctggcgctggagcgcgaccaccgcg
ctggccctgccgcgtttcgtcggcggccgcaaggtcgccccgcagttgcagcggatgaag
agtgaagatttgttggcgacggtgttcccggaccaggtcgcctgcgccgagaatctggtc
ggcgaacgcgaggtcccggaccatccgctggtcgcgcagaccttgcacgactgcctgtac
gaagcgatggacagcgccggttggctgcgcatgctgcgccggctggagctgggcgaggtg
caggtgatcgggcgcgatgtcaccgcgccgtcgccgatcgccgccgaagccatcaacgcg
cgcccgtacgctttcctcgacgacgcgccgctggaggagcgccgcacccaggcggtgatg
gcgcggcgttatgccgaggccgacagcgccggcgatctcggccggctcgatcccgaggcg
atcgaggcggtccgcggcgaggcctggccggaagtccgcgacgccgacgaaatgcacgag
gcgctgatggggctcggcttcgtcaccatcgccgaagcggcggcgaacgattggccgcgg
tggctgacggcgctggccgacagcggccgcgccactgccttgcgcctgtcggccagcgat
cccgcgccggcgtggtgggtcgcgaccgagaacctgccgcaggcgcgcgcactgttcgcc
gaggccctggccgagccggcggtggcggtgcccgaggaatacctggcgacggcgtggagc
ggcgaggaggctctggtcgagctgctgcgctcgcgcctgaccgcgctcggcccgaccacg
ttggcggccctggctcgcgacagccgccgcgatgccggcgagatcgaactggcgctgttg
cgcctggagcaggaaggctacgtcatgcgcggccgcttcggccgcgacagcctgctcggc
ggcgacgaggaatggtgcgaacggcatctgctcgcgcgcattcaccgctacaccgtcggc
cgcctgcggcgcgagatcgagccggtcgagccgcgcgatttcgcccgcttcctgttcgat
tggcaacatttgaccgcatcgacacggatgcacgggccgcaggccctgcgcgcggtgctg
gaacagctcgaaggctatgaagcgccggcttcggtgtgggagagcgagctgctgccggcg
cgcatcgctgactacgattcgagctggctcgacgaactgtgcagtgccggccgggtgacc
tgggcgcgcctgcgtccggatgcgaatgcaggcgccgtcaatggcgcagcggccgcgccc
gtgccgcaaggcgtgccgagcgtgcggcagacgccgatcgtgctgctgccgcgacgcgcg
ttggccgagtggcgcctcgccgccggccgcaaggccgatccggcgccggtgtcctcgcga
gcgcaacgcgtcctcgctgcgctcgaagcccgcggcgcgtcgttcttcgacgaactcgaa
cgcgacgcgcatctgctgcgcaccgaactggaagaagcgctcggcgaactggttacccgc
ggccgcatcacctgcgacagctacgccgggctgcgcgccttgctggtgccgccgtccaag
cgtgtgtcgacccacggtgcccgccgtcgccgcgccctgctgaccgacctgcaggatgcc
ggccgttggtcgctgaccgggccggctgaaggcgagggcgcgcctgccgacgcggcgcgc
aatgccgaagccaacgagcacatcgcctggcggttgctcgaacgctatggcgtggtgttc
tggcgcctgatccagcgcgaagccgcctggctgccgccctggcgcgacctgctgcgggtc
taccggcgcctggaagcgcgcggtgagatccgcggcggccgtttcgtcagcggtatgtcc
ggcgagcaattcgctttgcccgatgcagtcaacagcctgcgtcagatccgtcagcgcggc
cgcgacggcgcggtggtctgcgtgtccgcggccgacccgctgaacctcaccggcagcgtg
ctcgccggggtaaaagtgccgcgcatccccggtgcgcgcatcgccttccgcgacggcgtg
gcggtggcgagtctgttggccggtcaggtcgaggaactggtcgagttgcctgccgacatc
cagcgcgaggtccatcgcttgctgctgcgccgaccgggcagcgccgccgcagcggccgag
gccagcatcgccgaggtcatgcgcaatctggcgctgcgttga

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