Ligilactobacillus acidipiscis: LAC1533_1879
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Entry
LAC1533_1879 CDS
T05349
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca02020
Two-component system
laca02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAC1533_1879
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LAC1533_1879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laca03021
]
LAC1533_1879
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
laca02035
]
LAC1533_1879
Transcription machinery [BR:
laca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LAC1533_1879
Bacterial motility proteins [BR:
laca02035
]
Flagellar system
Flagellar assembly proteins
Stator
LAC1533_1879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
GerE
Motif
Other DBs
NCBI-ProteinID:
SFV41302
UniProt:
A0A0A7REL5
LinkDB
All DBs
Position
I:complement(2044698..2045405)
Genome browser
AA seq
235 aa
AA seq
DB search
MYEMNMEDQVIKYLPLVEKVVARITVKSSDYDYEDLFNTGVIGLIDALKKFDPQKKVPFE
SYAYVRIRGTIIDEIRSHGRLSRYKFDNLTRYYRAKQELEQELKREATDKELCSKLQINQ
KKLNDIYDSLHYMASISLEDVLFSAEQSPSRQEIFRDKKTGDAQAHLLETEMKQELAAAI
SKLSEREQLVLSLYYEQEMTLKEISLVLDVSIARVSQIHGRAVGKLKGFMEENDD
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgtatgagatgaatatggaagatcaagttatcaaatatttgcctttagttgaaaaggtc
gtcgctcggatcactgttaaaagctccgattatgactacgaagatctcttcaatactgga
gtgatcggcttgatcgatgcacttaagaaatttgatccacaaaagaaagtaccatttgaa
agttatgcttatgtacggatccgtgggaccatcattgatgagatccgcagtcacggtcgg
ttgtctcgttataaatttgacaatttgactcgctattatcgggctaagcaggaattagag
caagaattgaaacgagaagctactgacaaagaattatgcagtaagctccaaatcaatcag
aaaaagctgaacgatatttatgatagcttgcattatatggctagtatctctttggaggat
gtcttgttttcagcagaacaatcgcctagcagacaagagatctttcgtgataaaaaaacg
ggcgatgcacaagcacatttgttggaaacagaaatgaaacaggagttggcagcggcgatc
agcaagctttctgaaagagaacaattagttttgagtttgtattacgaacaggaaatgaca
cttaaagaaattagtttggtcttagacgtttctattgcacgcgtttcacagatccatggg
cgtgcagttggaaaactaaaaggatttatggaggaaaatgatgattag
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